RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 OSTM1Q86WC4 334 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NPAS4Q8IUM7 802 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 BADQ92934 168 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CENPTQ96BT3 561 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ZNF653Q96CK0 615 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 C18orf8Q96DM3 657 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TRIM31Q9BZY9 425 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 LRRC19Q9H756 370 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CNOT10Q9H9A5 744 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NOVA2Q9UNW9 492 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ATP8A1Q9Y2Q0 1164 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SNX24Q9Y343 169 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CHD9Q3L8U1 2897 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PTPRDP23468 1912 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 GBF1Q92538 1859 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TBKBP1A7MCY6 615 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FSCN2O14926 492 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TRAPPC3O43617 180 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 UNGP13051 313 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CD19P15391 556 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 LMO2P25791 158 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 BCAR1P56945 870 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 WDR5P61964 334 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 BYSLQ13895 437 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 C2CD6Q53TS8 623 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 WSCD1Q658N2 575 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CCDC137Q6PK04 289 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ACOT1Q86TX2 421 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 C12orf29Q8N999 325 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 APPL2Q8NEU8 664 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FBXO25Q8TCJ0 367 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PGM2Q96G03 612 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SENP8Q96LD8 212 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MYCBPQ99417 103 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CYP3A43Q9HB55 503 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FAM49BQ9NUQ9 324 aa13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-202ENST00000536708 GMNCA6NCL1 334 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 C5orf60A6NFR6 353 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TMEM110-MUSTN1A8MSY1 372 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CYB561D2O14569 222 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MYBL1P10243 752 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ACAT1P24752 427 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 HPDP32754 393 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RPL21P46778 160 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 OR1G1P47890 313 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PLTPP55058 493 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 YWHAEP62258 255 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 KRT71Q3SY84 523 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FBXW10Q5XX13 1052 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CCDC91Q7Z6B0 441 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 OR6B3Q8NGW1 331 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ZNF606Q8WXB4 792 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ART4Q93070 314 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PLVAPQ9BX97 442 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NRDE2Q9H7Z3 1164 aa13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MTRF1LQ9UGC7 380 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CHORDC1Q9UHD1 332 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ZMYND8Q9ULU4 1186 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TNRC18O15417 2968 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SPOPO43791 374 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 KIAA0754O94854 1291 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 FSBPO95073 299 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PDGFRBP09619 1106 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RARAP10276 462 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 BPIFB4P59827 614 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PSMC1P62191 440 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 IFFO1Q0D2I5 559 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SLMAPQ14BN4 828 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 LLGL2Q6P1M3 1020 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 LIMS2Q7Z4I7 341 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MAIP1Q8WWC4 291 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CPA5Q8WXQ8 436 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TRIM11Q96F44 468 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 TMEM176AQ96HP8 235 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 CENPHQ9H3R5 247 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 A8MXQ7 604 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 HUS1O60921 280 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ATP2C2O75185 946 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RARGP13631 454 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 RPL9P32969 192 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SLC1A1P43005 524 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 SEC24CP53992 1094 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MAGOHP61326 146 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 PTP4A2Q12974 167 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 ODF2Q5BJF6 829 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 C6orf89Q6UWU4 347 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 MCOLN2Q8IZK6 566 aa13.6□□□□□ -0.23
CDK5RAP3-202ENST00000536708 IL23AQ9NPF7 189 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms