RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 TMEM65Q6PI78 240 aa4.59□□□□□ -1.67
LINC02398-201ENST00000536666 LVRNQ6Q4G3 990 aa4.59□□□□□ -1.67
LINC02398-201ENST00000536666 DPY19L3Q6ZPD9 716 aa4.59□□□□□ -1.67
LINC02398-201ENST00000536666 ANKRD13BQ86YJ7 626 aa4.59□□□□□ -1.67
LINC02398-201ENST00000536666 C16orf71Q8IYS4 520 aaPredicted RBP4.59□□□□□ -1.67
LINC02398-201ENST00000536666 THOC3Q96J01 351 aaKnown RBP4.59□□□□□ -1.67
LINC02398-201ENST00000536666 PRR25Q96S07 402 aa4.59□□□□□ -1.67
LINC02398-201ENST00000536666 ZMYM2Q9UBW7 1377 aa4.59□□□□□ -1.67
LINC02398-201ENST00000536666 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
LINC02398-201ENST00000536666 FER1L4A9Z1Z3 1794 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 TNKSO95271 1327 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 MT-CO3P00414 261 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 CYP19A1P11511 503 aaPredicted RBP4.58□□□□□ -1.68
LINC02398-201ENST00000536666 RECQLP46063 649 aaPredicted RBP4.58□□□□□ -1.68
LINC02398-201ENST00000536666 HTR6P50406 440 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 MLC1Q15049 377 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 LY6KQ17RY6 165 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 TMEM63BQ5T3F8 832 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 C9orf47Q6ZRZ4 202 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 ZNF280BQ86YH2 543 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 RAB11FIP4Q86YS3 637 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 ZNF398Q8TD17 642 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 RSPRY1Q96DX4 576 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 CDK5RAP3Q96JB5 506 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 HIPK2Q9H2X6 1198 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 ASIC5Q9NY37 505 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 MAFFQ9ULX9 164 aa4.58□□□□□ -1.68
LINC02398-201ENST00000536666 VNN1O95497 513 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 IL33O95760 270 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 THP07101 528 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 POU2F2P09086 479 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 PSG1P11464 419 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 DGKEP52429 567 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 COPB1P53618 953 aaKnown RBP4.57□□□□□ -1.68
LINC02398-201ENST00000536666 WNT3P56703 355 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 NKX6-1P78426 367 aaPredicted RBP4.57□□□□□ -1.68
LINC02398-201ENST00000536666 ERV3-1Q14264 604 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 LEXMQ3ZCV2 418 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 MAP4K1Q92918 833 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 SNX15Q9NRS6 342 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 TMEM184CQ9NVA4 438 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 ZSCAN32Q9NX65 697 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 SPEF1Q9Y4P9 236 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 SNX14Q9Y5W7 946 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 HS3ST3B1Q9Y662 390 aa4.57□□□□□ -1.68
LINC02398-201ENST00000536666 B4DGG1 531 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 ALG1L2C9J202 215 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 TULP3O75386 442 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 T-ENOLP0DO92 83 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 GKP32189 559 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 SLC11A2P49281 568 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 DAB2IPQ5VWQ8 1189 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 CATIPQ7Z7H3 387 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.56□□□□□ -1.68
LINC02398-201ENST00000536666 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.56□□□□□ -1.68
LINC02398-201ENST00000536666 TMEM171Q8WVE6 324 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 HS6ST2Q96MM7 605 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 SMAD5Q99717 465 aaKnown RBP4.56□□□□□ -1.68
LINC02398-201ENST00000536666 MESP1Q9BRJ9 268 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 C17orf80Q9BSJ5 609 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 FAM234AQ9H0X4 552 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 CPA4Q9UI42 421 aa4.56□□□□□ -1.68
LINC02398-201ENST00000536666 NOTCH4Q99466 2003 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 TLR2O60603 784 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 PMPCBO75439 489 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 KCNA3P22001 575 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 CDKN2AP42771 156 aaKnown RBP4.55□□□□□ -1.68
LINC02398-201ENST00000536666 NANOS2P60321 138 aaKnown RBP4.55□□□□□ -1.68
LINC02398-201ENST00000536666 RPS13P62277 151 aaKnown RBP4.55□□□□□ -1.68
LINC02398-201ENST00000536666 PSG6Q00889 435 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 RNF187Q5TA31 235 aaPredicted RBP4.55□□□□□ -1.68
LINC02398-201ENST00000536666 EGFLAMQ63HQ2 1017 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 DEF8Q6ZN54 512 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 PTCHD4Q6ZW05 846 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 LIX1LQ8IVB5 337 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 SPARTQ8N0X7 666 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 ARFGAP1Q8N6T3 406 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 PNISRQ8TF01 805 aaKnown RBP4.55□□□□□ -1.68
LINC02398-201ENST00000536666 PPP2R3CQ969Q6 453 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 TRMOQ9BU70 441 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 HEY2Q9UBP5 337 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
LINC02398-201ENST00000536666 PRKAR1BP31321 381 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 MTHFSP49914 203 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 CDKN1CP49918 316 aaPredicted RBP4.54□□□□□ -1.68
LINC02398-201ENST00000536666 LMAN2Q12907 356 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 AWAT1Q58HT5 328 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 CC2D1BQ5T0F9 858 aaKnown RBP4.54□□□□□ -1.68
LINC02398-201ENST00000536666 CERCAMQ5T4B2 595 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 TMTC4Q5T4D3 741 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 LMBRD2Q68DH5 695 aaPredicted RBP4.54□□□□□ -1.68
LINC02398-201ENST00000536666 VSTM1Q6UX27 236 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 RANBP10Q6VN20 620 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 SLC15A4Q8N697 577 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 DNAJC5GQ8N7S2 189 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 ZNF548Q8NEK5 533 aaPredicted RBP4.54□□□□□ -1.68
LINC02398-201ENST00000536666 MVB12AQ96EY5 273 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 ARMT1Q9H993 441 aa4.54□□□□□ -1.68
LINC02398-201ENST00000536666 PIH1D1Q9NWS0 290 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms