RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 DDR2Q16832 855 aa13.26□□□□□ -0.29
PRKDC-207ENST00000536483 CC2D1AQ6P1N0 951 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-207ENST00000536483 ZFHX4Q86UP3 3567 aa13.26□□□□□ -0.29
PRKDC-207ENST00000536483 GAB3Q8WWW8 586 aa13.26□□□□□ -0.29
PRKDC-207ENST00000536483 MRPS31Q92665 395 aaKnown RBP13.26□□□□□ -0.29
PRKDC-207ENST00000536483 ATG2BQ96BY7 2078 aa13.26□□□□□ -0.29
PRKDC-207ENST00000536483 MRPL45Q9BRJ2 306 aaKnown RBP13.26□□□□□ -0.29
PRKDC-207ENST00000536483 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
PRKDC-207ENST00000536483 SLC8A2Q9UPR5 921 aa13.26□□□□□ -0.29
PRKDC-207ENST00000536483 MAPK8IP1Q9UQF2 711 aa13.26□□□□□ -0.29
PRKDC-207ENST00000536483 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 CCDC163A0A0D9SF12 145 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 HCRTO43612 131 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 ATG13O75143 517 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 RNF40O75150 1001 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 PHACTR2O75167 634 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 ATP2C2O75185 946 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 EGFP01133 1207 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 CCDC192P0DO97 292 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
PRKDC-207ENST00000536483 PPP1R2P41236 205 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 GALK1P51570 392 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 TNNC1P63316 161 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 LRRC63Q05C16 580 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 ZNF699Q32M78 642 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 AASDHQ4L235 1098 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-207ENST00000536483 ZNF667Q5HYK9 610 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 NAIF1Q69YI7 327 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-207ENST00000536483 CACNA2D4Q7Z3S7 1137 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 KBTBD6Q86V97 674 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 MON1AQ86VX9 555 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-207ENST00000536483 FAM186BQ8IYM0 893 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 SMARCE1Q969G3 411 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 C8orf48Q96LL4 319 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 FAM124BQ9H5Z6 455 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-207ENST00000536483 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 RXFP3Q9NSD7 469 aa13.25□□□□□ -0.29
PRKDC-207ENST00000536483 MAGEC2Q9UBF1 373 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-207ENST00000536483 UXTQ9UBK9 157 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-207ENST00000536483 KMT2BQ9UMN6 2715 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-207ENST00000536483 CETN3O15182 167 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 TADA3O75528 432 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 EPN2O95208 641 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 ZNF806P0C7X5 589 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 P4HA1P13674 534 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 PFKLP17858 780 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 RAP1GAPP47736 663 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 NOP14P78316 857 aaKnown RBP13.24□□□□□ -0.29
PRKDC-207ENST00000536483 FKBP3Q00688 224 aaKnown RBP13.24□□□□□ -0.29
PRKDC-207ENST00000536483 AMPD2Q01433 879 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 PPP3CAQ08209 521 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 BIRC3Q13489 604 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-207ENST00000536483 CCDC142Q17RM4 750 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 IL31Q6EBC2 164 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 CLEC17AQ6ZS10 378 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 CRYBG2Q8N1P7 616 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 C12orf50Q8NA57 414 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-207ENST00000536483 TTC16Q8NEE8 873 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 MYLPFQ96A32 169 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 DHTKD1Q96HY7 919 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-207ENST00000536483 LOXL4Q96JB6 756 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 CYP2S1Q96SQ9 504 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 TTLL2Q9BWV7 592 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 TMEM8AQ9HCN3 771 aa13.24□□□□□ -0.29
PRKDC-207ENST00000536483 MAP1BP46821 2468 aaKnown RBP13.24□□□□□ -0.29
PRKDC-207ENST00000536483 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
PRKDC-207ENST00000536483 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-207ENST00000536483 HLA-DRAP01903 254 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 PDGFRBP09619 1106 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 KRT13P13646 458 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 DRD1P21728 446 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 GJA4P35212 333 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 LIMK1P53667 647 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 MTF1Q14872 753 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 PDGFRLQ15198 375 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 ANKRD40Q6AI12 368 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 SMYD4Q8IYR2 804 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-207ENST00000536483 CAMKK1Q8N5S9 505 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 B3GALNT2Q8NCR0 500 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
PRKDC-207ENST00000536483 TNIP3Q96KP6 325 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 HHIPQ96QV1 700 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 P2RY13Q9BPV8 354 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 ELOVL4Q9GZR5 314 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 SDCBP2Q9H190 292 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 SMOC1Q9H4F8 434 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 ECT2Q9H8V3 914 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 TRPC7Q9HCX4 862 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 IL37Q9NZH6 218 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms