RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KRT35Q92764 455 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 P2RX5Q93086 422 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 BHMTQ93088 406 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 FBXL18Q96ME1 805 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 COQ7Q99807 217 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ALG2Q9H553 416 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TMEM206Q9H813 350 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 LY9Q9HBG7 655 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 IL1RAPL1Q9NZN1 696 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ZSWIM5Q9P217 1185 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 AJAP1Q9UKB5 411 aaPredicted RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 DMTF1Q9Y222 760 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 DNAJC16Q9Y2G8 782 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 FLT1P17948 1338 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 COL4A5P29400 1685 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ATP2A1O14983 1001 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 PFDN6O15212 129 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 DNAJA2O60884 412 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 FKBP6O75344 327 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ATP5HO75947 161 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 MYO1DO94832 1006 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 KCNH1O95259 989 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 PLEKHA8P1O95397 391 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 EYA4O95677 639 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ESRRBO95718 433 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 CRYZL1O95825 349 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ABCB1P08183 1280 aaPredicted RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 HOXB7P09629 217 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 SRGAP2CP0DJJ0 459 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 SRGAP2BP0DMP2 458 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 RAG1P15918 1043 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 CA4P22748 312 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ANXA13P27216 316 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 RFC1P35251 1148 aaPredicted RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 IREB2P48200 963 aaKnown RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 NDST2P52849 883 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 IST1P53990 364 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 AP2B1P63010 937 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 AMPD3Q01432 767 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 UBAP2LQ14157 1087 aaKnown RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 TAF12Q16514 161 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 RABL6Q3YEC7 729 aaPredicted RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 FGD3Q5JSP0 725 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TTC38Q5R3I4 469 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 PLEKHA7Q6IQ23 1121 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ZNF790Q6PG37 636 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 PTAR1Q7Z6K3 402 aaPredicted RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 DNAJC10Q8IXB1 793 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 KIAA2013Q8IYS2 634 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 SRBD1Q8N5C6 995 aaKnown RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 SLC15A4Q8N697 577 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TP53I13Q8NBR0 393 aaPredicted RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 IGDCC4Q8TDY8 1250 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 SLC7A3Q8WY07 619 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ATG4AQ8WYN0 398 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 IRGQQ8WZA9 623 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 MTBPQ96DY7 904 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 BTBD6Q96KE9 485 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 MYD88Q99836 296 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TMEM120AQ9BXJ8 343 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 FANCEQ9HB96 536 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 RSL24D1Q9UHA3 163 aaKnown RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 TTLL3Q9Y4R7 772 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 RTL9Q8NET4 1388 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 FCHO1O14526 889 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 BIRC5O15392 142 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 GPAA1O43292 621 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 PHF2O75151 1096 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 NDUFS2O75306 463 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 CRTAMO95727 393 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 RECKO95980 971 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 CFHP08603 1231 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 KRT10P13645 584 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 FGFR3P22607 806 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 PTGIRP43119 386 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 CASP5P51878 434 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ALDH18A1P54886 795 aaKnown RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 EIF6P56537 245 aaKnown RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 ARL4CP56559 192 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 IL9RQ01113 521 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 STRN3Q13033 797 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 SELENBP1Q13228 472 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 ITGA9Q13797 1035 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 KRT81Q14533 505 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 SLC18A3Q16572 532 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 NRF1Q16656 503 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 C15orf59Q2T9L4 293 aaPredicted RBP3.88□□□□□ -1.79
MCF2-210ENST00000536274 LVRNQ6Q4G3 990 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 PPP1R21Q6ZMI0 780 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TRIM72Q6ZMU5 477 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TAS2R42Q7RTR8 314 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 MIER3Q7Z3K6 550 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 DHDDSQ86SQ9 333 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 RSPH3Q86UC2 560 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 NT5DC3Q86UY8 548 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 CCDC105Q8IYK2 499 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TTC5Q8N0Z6 440 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TTC39CQ8N584 583 aa3.88□□□□□ -1.79
MCF2-210ENST00000536274 TRIML2Q8N7C3 387 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms