RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 CFHR1Q03591 330 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 ARHGAP1Q07960 439 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 KCNAB2Q13303 367 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 CCDC158Q5M9N0 1113 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 TCEAL6Q6IPX3 200 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 ZNF852Q6ZMS4 543 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 CHCHD4Q8N4Q1 142 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 BVESQ8NE79 360 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 CHURC1Q8WUH1 139 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 TCEAL3Q969E4 200 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 EPB41L1Q9H4G0 881 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 SLC32A1Q9H598 525 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 PIH1D3Q9NQM4 214 aaKnown RBP4.58□□□□□ -1.68
YBX3-205ENST00000536107 ARHGAP20Q9P2F6 1191 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 APEX2Q9UBZ4 518 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 CLIP2Q9UDT6 1046 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 PPT2Q9UMR5 302 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 NDRG2Q9UN36 371 aaKnown RBP4.58□□□□□ -1.68
YBX3-205ENST00000536107 MRPS17Q9Y2R5 130 aaKnown RBP4.58□□□□□ -1.68
YBX3-205ENST00000536107 GIT1Q9Y2X7 761 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 NUMBLQ9Y6R0 609 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 AKAP13Q12802 2813 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 KALRNO60229 2985 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 LOC102724159A0A0B4J2E5 919 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 SPAARA0A1B0GVQ0 90 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 ANKRD34BA5PLL1 514 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 H0Y626 953 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 HAS3O00219 553 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 ARNTLO00327 626 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 N4BP1O75113 896 aaKnown RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 RHOBTB3O94955 611 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 TRIM16O95361 564 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 CHRNA1P02708 482 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 CSRP1P21291 193 aaKnown RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 CD52P31358 61 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 GJA4P35212 333 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 PPM1AP35813 382 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 RPS9P46781 194 aaKnown RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 CXCL12P48061 93 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 GLRBP48167 497 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 STAT2P52630 851 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 RARSP54136 660 aaKnown RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 PFKPQ01813 784 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 LSAMPQ13449 338 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 NFYCQ13952 458 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 LPIN1Q14693 890 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 PWP2Q15269 919 aaKnown RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 COLEC12Q5KU26 742 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 GTF2IRD2BQ6EKJ0 949 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 RSPO2Q6UXX9 243 aaPredicted RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 DNAJC14Q6Y2X3 702 aaPredicted RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 TSHZ1Q6ZSZ6 1077 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 TPRG1Q6ZUI0 275 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 GET4Q7L5D6 327 aaPredicted RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 RASGRP2Q7LDG7 609 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 RSPH3Q86UC2 560 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 GTF2IRD2Q86UP8 949 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 LONP2Q86WA8 852 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 C19orf47Q8N9M1 422 aaKnown RBP4.57□□□□□ -1.68
YBX3-205ENST00000536107 MDM1Q8TC05 714 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 SDR42E1Q8WUS8 393 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 CLDN23Q96B33 292 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 SPATA33Q96N06 139 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 ZNF558Q96NG5 402 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 FTHL17Q9BXU8 183 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 VPS45Q9NRW7 570 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 TCP11L1Q9NUJ3 509 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 SETD4Q9NVD3 440 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 PLA2G3Q9NZ20 509 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 SPG21Q9NZD8 308 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 EPS15L1Q9UBC2 864 aa4.57□□□□□ -1.68
YBX3-205ENST00000536107 DOPEY1Q5JWR5 2465 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 TRIP12Q14669 1992 aaPredicted RBP4.56□□□□□ -1.68
YBX3-205ENST00000536107 SCN10AQ9Y5Y9 1956 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 FREM2Q5SZK8 3169 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 CACNA1IQ9P0X4 2223 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 CYP2D7A0A087X1C5 515 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 A0A0A6YYK5 440 aaPredicted RBP4.56□□□□□ -1.68
YBX3-205ENST00000536107 SLC28A2O43868 658 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 PPFIA4O75335 1185 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 MYBP10242 640 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 LAMP2P13473 410 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 KLRC2P26717 231 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 MSX2P35548 267 aaPredicted RBP4.56□□□□□ -1.68
YBX3-205ENST00000536107 MPLP40238 635 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 PBX3P40426 434 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 SATB1Q01826 763 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 PAK2Q13177 524 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 HTR4Q13639 388 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 TESK1Q15569 626 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 FAM102BQ5T8I3 360 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 CCDC62Q6P9F0 684 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 KCNT2Q6UVM3 1135 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 SLC30A10Q6XR72 485 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 CACNA2D4Q7Z3S7 1137 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 FAM160B2Q86V87 743 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 TRIM59Q8IWR1 403 aa4.56□□□□□ -1.68
YBX3-205ENST00000536107 LSM14AQ8ND56 463 aaKnown RBP4.56□□□□□ -1.68
YBX3-205ENST00000536107 PPTC7Q8NI37 304 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms