RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 GREB1Q4ZG55 1949 aa13.96□□□□□ -0.18
RTN3-207ENST00000536011 ZNF840PA6NDX5 716 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 LRRIQ3A6PVS8 624 aaPredicted RBP13.95□□□□□ -0.18
RTN3-207ENST00000536011 HRO43593 1189 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 KLRC4O43908 158 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 RPP40O75818 363 aaKnown RBP13.95□□□□□ -0.18
RTN3-207ENST00000536011 ABL1P00519 1130 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 EGFP01133 1207 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 NR3C1P04150 777 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 SYKP43405 635 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 CASP4P49662 377 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 GALK1P51570 392 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 USP46P62068 366 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 SPEM2Q0P670 501 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 SGSM1Q2NKQ1 1148 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 KIAA0895Q8NCT3 520 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 TMC2Q8TDI7 906 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 GAB3Q8WWW8 586 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 ZNF516Q92618 1163 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 SMARCD1Q96GM5 515 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 ZNF518BQ9C0D4 1074 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 GZF1Q9H116 711 aaPredicted RBP13.95□□□□□ -0.18
RTN3-207ENST00000536011 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
RTN3-207ENST00000536011 DMAC2Q9NW81 257 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 ANAPC1Q9H1A4 1944 aa13.95□□□□□ -0.18
RTN3-207ENST00000536011 A0A1B0GVL5 298 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 LEFTY2O00292 366 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 IKBKBO14920 756 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 OLFM2O95897 454 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 CCDC192P0DO97 292 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 YWHAQP27348 245 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 TAF10Q12962 218 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 CSRP2Q16527 193 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 SCARA5Q6ZMJ2 495 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 SYT13Q7L8C5 426 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 FAM160A2Q8N612 972 aaPredicted RBP13.94□□□□□ -0.18
RTN3-207ENST00000536011 NETO1Q8TDF5 533 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 B3GNT5Q9BYG0 378 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 SCAND2PQ9GZW5 306 aaPredicted RBP13.94□□□□□ -0.18
RTN3-207ENST00000536011 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 SEMA4GQ9NTN9 838 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 C2orf42Q9NWW7 574 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 HPSEQ9Y251 543 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 CPQQ9Y646 472 aa13.94□□□□□ -0.18
RTN3-207ENST00000536011 MAPK13O15264 365 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 APBB3O95704 486 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 ADH1CP00326 375 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
RTN3-207ENST00000536011 C4BPAP04003 597 aaKnown RBP13.93□□□□□ -0.18
RTN3-207ENST00000536011 TGM1P22735 817 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
RTN3-207ENST00000536011 PIK3CAP42336 1068 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 TUBP50607 506 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
RTN3-207ENST00000536011 SRSF5Q13243 272 aaKnown RBP13.93□□□□□ -0.18
RTN3-207ENST00000536011 ZACNQ401N2 412 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 PKN3Q6P5Z2 889 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 RPLP0P6Q8NHW5 317 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 FBXO32Q969P5 355 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 TBC1D14Q9P2M4 693 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
RTN3-207ENST00000536011 CLDN5O00501 218 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 AXIN1O15169 862 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
RTN3-207ENST00000536011 KRT13P13646 458 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 EIF2DP41214 584 aaKnown RBP13.92□□□□□ -0.18
RTN3-207ENST00000536011 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 CACNA2D1P54289 1103 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 CDH8P55286 799 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 ENPEPQ07075 957 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 HECTD3Q5T447 861 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 PRR23CQ6ZRP0 262 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
RTN3-207ENST00000536011 FILIP1Q7Z7B0 1213 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 C11orf74Q86VG3 221 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 NACA2Q9H009 215 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 FBXO44Q9H4M3 255 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
RTN3-207ENST00000536011 KRT82Q9NSB4 513 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
RTN3-207ENST00000536011 CFAP97Q9P2B7 532 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms