RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 MYO1FO00160 1098 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 TRUB2O95900 331 aaKnown RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 KRT19P08727 400 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 FAM153BP0C7A2 387 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 IL4RP24394 825 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 CD52P31358 61 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 BCAT1P54687 386 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 NAP1L1P55209 391 aaKnown RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 ZNF211Q13398 564 aaPredicted RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 MRPL58Q14197 206 aaKnown RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 FAM153CQ494X1 144 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 CLLU1OSQ5K130 101 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 CYP4A22Q5TCH4 519 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 CCDC181Q5TID7 509 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 IFT20Q8IY31 132 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 SLC35B2Q8TB61 432 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 NKD2Q969F2 451 aaPredicted RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 RTP4Q96DX8 246 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 ERP44Q9BS26 406 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 AP1M1Q9BXS5 423 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 PHACTR1Q9C0D0 580 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 DDX47Q9H0S4 455 aaKnown RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 TMEM30AQ9NV96 361 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 FAM153AQ9UHL3 310 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 DRG1Q9Y295 367 aaKnown RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 GBF1Q92538 1859 aa8.4□□□□□ -1.06
COL21A1-212ENST00000535941 MDM4O15151 490 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 TBC1D4O60343 1298 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 ELF1P32519 619 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 SSTR3P32745 418 aaPredicted RBP8.4□□□□□ -1.07
COL21A1-212ENST00000535941 MLH1P40692 756 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 CLCNKBP51801 687 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 SLC7A5Q01650 507 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 SLC6A3Q01959 620 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 MAP9Q49MG5 647 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 GLRA4Q5JXX5 417 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 DAB2IPQ5VWQ8 1189 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 DNAJC24Q6P3W2 148 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 JAMLQ86YT9 394 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 COLGALT2Q8IYK4 626 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 ADGRF2Q8IZF7 708 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 B3GALNT2Q8NCR0 500 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 DUSP16Q9BY84 665 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.4□□□□□ -1.07
COL21A1-212ENST00000535941 PNPLA8Q9NP80 782 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 R3HDM2Q9Y2K5 976 aaKnown RBP8.4□□□□□ -1.07
COL21A1-212ENST00000535941 PTCH2Q9Y6C5 1203 aa8.4□□□□□ -1.07
COL21A1-212ENST00000535941 E5RJQ4 531 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 M0QYV0 167 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 M0QZ92 97 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 PODXLO00592 558 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 TTI1O43156 1089 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 NBNO60934 754 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 IGLV3-25P01717 112 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 TYMPP19971 482 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 GRK4P32298 578 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 PAK2Q13177 524 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 ORC1Q13415 861 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 SPOCD1Q6ZMY3 1216 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 ZMIZ2Q8NF64 920 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 MAIP1Q8WWC4 291 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 SUSD3Q96L08 255 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 MIS12Q9H081 205 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 RC3H2Q9HBD1 1191 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 AAASQ9NRG9 546 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 SNX9Q9Y5X1 595 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 TRPA1O75762 1119 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 SEL1L2Q5TEA6 688 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 CLEC20AQ6ZU45 233 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 RBM41Q96IZ5 413 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 TACO1Q9BSH4 297 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 DDX23Q9BUQ8 820 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 B3GNT5Q9BYG0 378 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 METTL5Q9NRN9 209 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 FAM114A2Q9NRY5 505 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 MTMR10Q9NXD2 777 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 IL37Q9NZH6 218 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 KLK14Q9P0G3 267 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 WHRNQ9P202 907 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 AMACRQ9UHK6 382 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 ZNF106Q9H2Y7 1883 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 BPTFQ12830 3046 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 LIASO43766 372 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 FYNP06241 537 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 THP07101 528 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 KRT3P12035 628 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 GBP1P32455 592 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 THPOP40225 353 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 CCT5P48643 541 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 GUCY2DQ02846 1103 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 SLC9A4Q6AI14 798 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 PM20D1Q6GTS8 502 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 LRIG3Q6UXM1 1119 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 TMC3Q7Z5M5 1100 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 PSTKQ8IV42 348 aaKnown RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 GSPT2Q8IYD1 628 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms