RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 ANXA13P27216 316 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 PRCPP42785 496 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 MAGEA9P43362 315 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 SOX9P48436 509 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
CHD4-204ENST00000535810 MCCD1P59942 119 aaPredicted RBP9.41□□□□□ -0.9
CHD4-204ENST00000535810 USP46P62068 366 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 NOP14P78316 857 aaKnown RBP9.41□□□□□ -0.9
CHD4-204ENST00000535810 TNK2Q07912 1038 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 FZD5Q13467 585 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 ARHGAP29Q52LW3 1261 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 SPOPLQ6IQ16 392 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 DENND5BQ6ZUT9 1274 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 C1orf210Q8IVY1 113 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 MAML2Q8IZL2 1156 aaPredicted RBP9.41□□□□□ -0.9
CHD4-204ENST00000535810 RIN3Q8TB24 985 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 BPIFB1Q8TDL5 484 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 CSGALNACT1Q8TDX6 532 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 TAS1R2Q8TE23 839 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 SMARCE1Q969G3 411 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 C8orf48Q96LL4 319 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 SLC22A12Q96S37 553 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 NELL2Q99435 816 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 TTLL2Q9BWV7 592 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 B3GNT5Q9BYG0 378 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 KIF9Q9HAQ2 790 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 TRPC7Q9HCX4 862 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 CHMP5Q9NZZ3 219 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 HMGXB4Q9UGU5 601 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 PCDHA5Q9Y5H7 936 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 PKD1L2Q7Z442 2459 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 GREB1Q4ZG55 1949 aa9.41□□□□□ -0.9
CHD4-204ENST00000535810 TRAV19A0A0A6YYK7 116 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 C2orf78A6NCI8 922 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 SPECC1L-ADORA2AF8WAN1 911 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 CLDN5O00501 218 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 CETN3O15182 167 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 KINO60870 393 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 EPB41P11171 864 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 CCNE1P24864 410 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 CTHP32929 405 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 RPS9P46781 194 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 KPNA1P52294 538 aaPredicted RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 PMS1P54277 932 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 ORC1Q13415 861 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 C1orf228Q6PIY5 440 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 TXNDC11Q6PKC3 985 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 PAQR9Q6ZVX9 377 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 ACOT1Q86TX2 421 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 FAM35AQ86V20 835 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 ZC3H3Q8IXZ2 948 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 ELOA2Q8IYF1 753 aaPredicted RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 FUKQ8N0W3 1084 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 FAM3CQ92520 227 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 TNIP3Q96KP6 325 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 FAM83CQ9BQN1 747 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 IMPG2Q9BZV3 1241 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 SEMA4AQ9H3S1 761 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 MMRN2Q9H8L6 949 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 APOBEC3GQ9HC16 384 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■■■■ 35.5
CHD4-204ENST00000535810 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 TDP1Q9NUW8 608 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 SPATA6Q9NWH7 488 aaPredicted RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 THG1LQ9NWX6 298 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 GTSE1Q9NYZ3 720 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 GCNT4Q9P109 453 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 HOOK1Q9UJC3 728 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 NDRG2Q9UN36 371 aaKnown RBP9.4□□□□□ -0.9
CHD4-204ENST00000535810 OTOGLQ3ZCN5 2332 aa9.4□□□□□ -0.9
CHD4-204ENST00000535810 PATJQ8NI35 1801 aa9.4□□□□□ -0.91
CHD4-204ENST00000535810 CEP250Q9BV73 2442 aa9.4□□□□□ -0.91
CHD4-204ENST00000535810 ATP8B3O60423 1300 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 ZNF840PA6NDX5 716 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 OTOL1A6NHN0 477 aaPredicted RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 NCAM2O15394 837 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 SLC16A3O15427 465 aaKnown RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 CKMP06732 381 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 USP17L7P0C7H9 530 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 SP9P0CG40 484 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 CCDC130P13994 396 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 GTF2H1P32780 548 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 MXI1P50539 228 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 NDST1P52848 882 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 LRRC63Q05C16 580 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 INCA1Q0VD86 236 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 TAF10Q12962 218 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 USP4Q13107 963 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 MTAPQ13126 283 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 ZNF77Q15935 545 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 KRT39Q6A163 491 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 UNC93AQ86WB7 457 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 RALGPS2Q86X27 583 aaPredicted RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 CRYBG2Q8N1P7 616 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms