RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 FBXO43Q4G163 708 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 NAIF1Q69YI7 327 aaPredicted RBP9.47□□□□□ -0.89
COPB1-211ENST00000534234 SCARA5Q6ZMJ2 495 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 PAQR9Q6ZVX9 377 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 DGLUCYQ7Z3D6 616 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 ADGRG2Q8IZP9 1017 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 CD101Q93033 1021 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 MED10Q9BTT4 135 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 DLL3Q9NYJ7 618 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 CHORDC1Q9UHD1 332 aaPredicted RBP9.47□□□□□ -0.89
COPB1-211ENST00000534234 SLC8A2Q9UPR5 921 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 MAPK8IP1Q9UQF2 711 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 ZNF292O60281 2723 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 COL4A2P08572 1712 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 WDR87Q6ZQQ6 2873 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 A0A1W2PQ27 194 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 A0A1W2PQ64 194 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 A0A1W2PQD8 194 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 PRR5-ARHGAP8B1AHC4 643 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 RTN3O95197 1032 aaPredicted RBP9.46□□□□□ -0.89
COPB1-211ENST00000534234 NFATC1O95644 943 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 PRR29P0C7W0 189 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 ARHGAP8P85298 464 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 LMNB2Q03252 620 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 DPYDQ12882 1025 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 KRBA2Q6ZNG9 492 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 CEP68Q76N32 757 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 ACOT1Q86TX2 421 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 WDR5BQ86VZ2 330 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 CRYBG2Q8N1P7 616 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 CAMKK1Q8N5S9 505 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 SCAMP5Q8TAC9 235 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 TAF4BQ92750 862 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 SDCBP2Q9H190 292 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 PARD6AQ9NPB6 346 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 POLR3BQ9NW08 1133 aaPredicted RBP9.46□□□□□ -0.89
COPB1-211ENST00000534234 SMPD4Q9NXE4 827 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 CPQQ9Y646 472 aa9.46□□□□□ -0.89
COPB1-211ENST00000534234 ATP8B3O60423 1300 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 SPTBN4Q9H254 2564 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 CCDC163A0A0D9SF12 145 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 MAPK13O15264 365 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 ZNF202O95125 648 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 OLFM2O95897 454 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 ASS1P00966 412 aaKnown RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 OAS1P00973 400 aaKnown RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 HLA-DRAP01903 254 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 MBL2P11226 248 aaPredicted RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 SDHBP21912 280 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 NR2F2P24468 414 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 RPL13P26373 211 aaKnown RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 VAMP7P51809 220 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 NDST1P52848 882 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 ADAM9Q13443 819 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 C1orf220Q5T0J3 134 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 SPOPLQ6IQ16 392 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 FILIP1Q7Z7B0 1213 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 FAM35AQ86V20 835 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 UNC93AQ86WB7 457 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 FUKQ8N0W3 1084 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 GUF1Q8N442 669 aaKnown RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 PDZD8Q8NEN9 1154 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 OVCA2Q8WZ82 227 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 EZH1Q92800 747 aaPredicted RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 FBXO32Q969P5 355 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 SMARCD1Q96GM5 515 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 DMAP1Q9NPF5 467 aaPredicted RBP9.46□□□□□ -0.9
COPB1-211ENST00000534234 CFAP97Q9P2B7 532 aa9.46□□□□□ -0.9
COPB1-211ENST00000534234 MIA3Q5JRA6 1907 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 TICRRQ7Z2Z1 1910 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 SLC9A3R1O14745 358 aaPredicted RBP9.45□□□□□ -0.9
COPB1-211ENST00000534234 TNFRSF10BO14763 440 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 SCAMP3O14828 347 aaKnown RBP9.45□□□□□ -0.9
COPB1-211ENST00000534234 LRP3O75074 770 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 AP1G2O75843 785 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 AKAP3O75969 853 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 KRT13P13646 458 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 CCDC130P13994 396 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 PSMC2P35998 433 aaKnown RBP9.45□□□□□ -0.9
COPB1-211ENST00000534234 OPRD1P41143 372 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 PIK3CAP42336 1068 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 GCLMP48507 274 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 SLC5A3P53794 718 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 ORC1Q13415 861 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 NFIL3Q16649 462 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 HECTD3Q5T447 861 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 INTS8Q75QN2 995 aaKnown RBP9.45□□□□□ -0.9
COPB1-211ENST00000534234 SYT13Q7L8C5 426 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 FAM160A2Q8N612 972 aaPredicted RBP9.45□□□□□ -0.9
COPB1-211ENST00000534234 KIAA1958Q8N8K9 716 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 C12orf29Q8N999 325 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 RPLP0P6Q8NHW5 317 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 CCDC26Q8TAB7 109 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 SLC2A14Q8TDB8 520 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 GAB3Q8WWW8 586 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 IMPG2Q9BZV3 1241 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms