RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ANP32CO43423 234 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 PRAMEF10O60809 474 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 GRPP07492 148 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 PIM1P11309 404 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 FCER1AP12319 257 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 DDX6P26196 483 aaKnown RBP eCLIP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 LRPAP1P30533 357 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 HTRA4P83105 476 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 EXOSC9Q06265 439 aaKnown RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 PFKFB4Q16877 469 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 BEAN1Q3B7T3 259 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 TAPT1Q6NXT6 567 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 LAYNQ6UX15 382 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ATG16L2Q8NAA4 619 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ATP11CQ8NB49 1132 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 PDPRQ8NCN5 879 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 TMIEQ8NEW7 156 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ZNF566Q969W8 418 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ZNF503Q96F45 646 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 RMDN3Q96TC7 470 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 BRIP1Q9BX63 1249 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 STK33Q9BYT3 514 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 MAGEH1Q9H213 219 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 A1CFQ9NQ94 594 aaKnown RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 COL20A1Q9P218 1284 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 GJD2Q9UKL4 321 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 CDYLQ9Y232 598 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 RAD54BQ9Y620 910 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 NCANO14594 1321 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 PRSS29PA6NIE9 313 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 BTN3A1O00481 513 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 TRIAP1O43715 76 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 CDKL5O76039 1030 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 FGFR2P21802 821 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 RRM1P23921 792 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ANP32AP39687 249 aaKnown RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 CXADRP78310 365 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 IRX3P78415 501 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 GUCY1B3Q02153 619 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 OCA2Q04671 838 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 FPGSQ05932 587 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 PRKG1Q13976 671 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 POSTNQ15063 836 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ZACNQ401N2 412 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 C3orf38Q5JPI3 329 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 INTS11Q5TA45 600 aaKnown RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ABHD17BQ5VST6 288 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 DBX2Q6ZNG2 339 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 USP51Q70EK9 711 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 RSRC2Q7L4I2 434 aaKnown RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ARHGEF19Q8IW93 802 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 TXLNBQ8N3L3 684 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 SH3RF3Q8TEJ3 882 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 SMCR8Q8TEV9 937 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 ZNF483Q8TF39 744 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 RNF31Q96EP0 1072 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 OSBPL9Q96SU4 736 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 EIF2AQ9BY44 585 aaKnown RBP4.06□□□□□ -1.76
CSMD3-210ENST00000534172 SACM1LQ9NTJ5 587 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 LRFN1Q9P244 771 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 MYO1AQ9UBC5 1043 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 SRRDQ9UH36 339 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 HDAC9Q9UKV0 1011 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 TNIKQ9UKE5 1360 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 KIAA1210Q9ULL0 1709 aa4.06□□□□□ -1.76
CSMD3-210ENST00000534172 GOLGA6L3A6NEY3 463 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 RRN3P2A6NIE6 340 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 MARCH11A6NNE9 402 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 EYA2O00167 538 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 ABHD16AO95870 558 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 HDCP19113 662 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 ITGALP20701 1170 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 MAKP20794 623 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 KLRC1P26715 233 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 IQCB1Q15051 598 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 PTPAQ15257 358 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TOMM20Q15388 145 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TAF5Q15542 800 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 LRRC55Q6ZSA7 311 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 PPP1R32Q7Z5V6 425 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 CPEB3Q8NE35 698 aaKnown RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TRIM44Q96DX7 344 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 P2RX7Q99572 595 aaKnown RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 SORBS1Q9BX66 1292 aaKnown RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 ALOXE3Q9BYJ1 711 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 ZCWPW1Q9H0M4 648 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 OBP2BQ9NPH6 170 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 HESX1Q9UBX0 185 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 SLC45A2Q9UMX9 530 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 REREQ9P2R6 1566 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 AATKQ6ZMQ8 1374 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 ABCA8O94911 1581 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TRIM43BA6NCK2 446 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 LGALS16A8MUM7 142 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 M0QYG6 137 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 EIF3FO00303 357 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 SNX2O60749 519 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 FAM20BO75063 409 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 UNC5CO95185 931 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms