RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 WDR59Q6PJI9 974 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 CYP26C1Q6V0L0 522 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 TOGARAM2Q6ZUX3 1019 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 ZNF765Q7L2R6 523 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 TRMT1LQ7Z2T5 733 aaKnown RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 REXO1L1PQ8IX06 675 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 KREMEN2Q8NCW0 462 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 NEK11Q8NG66 645 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 AFG1LQ8WV93 481 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 TCP11Q8WWU5 503 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 PSPC1Q8WXF1 523 aaKnown RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 SYN2Q92777 582 aaPredicted RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 RELTQ969Z4 430 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 C1orf159Q96HA4 380 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 MFSD14AQ96MC6 490 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 C16orf70Q9BSU1 422 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 LSM14BQ9BX40 385 aaKnown RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 MRPL4Q9BYD3 311 aaKnown RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 NFKBIZQ9BYH8 718 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 C7orf69Q9H7B7 122 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 CAAP1Q9H8G2 361 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 SIX2Q9NPC8 291 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 FAM207AQ9NSI2 230 aaPredicted RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 FLRT1Q9NZU1 646 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 GJD2Q9UKL4 321 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 ZHX1Q9UKY1 873 aaPredicted RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 ZNF215Q9UL58 517 aaPredicted RBP6.15□□□□□ -1.42
CHKA-208ENST00000533910 MYO6Q9UM54 1294 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 PLAGL2Q9UPG8 496 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 ATP8A1Q9Y2Q0 1164 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 PPP2R2CQ9Y2T4 447 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 PCDHA9Q9Y5H5 950 aa6.15□□□□□ -1.42
CHKA-208ENST00000533910 SCN10AQ9Y5Y9 1956 aa6.15□□□□□ -1.43
CHKA-208ENST00000533910 LRRIQ4A6NIV6 560 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 TTC36A6NLP5 189 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 LRRC53A6NM62 1247 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 TNPO2O14787 897 aaKnown RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 P4HA2O15460 535 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 MAGEB2O15479 319 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 F2P00734 622 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 TUBB4AP04350 444 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 EDN1P05305 212 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 CCDC175P0C221 793 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 ZNF286BP0CG31 522 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 TRIM49P0CI25 452 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 TRIM49CP0CI26 452 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 KRT13P13646 458 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 FSTP19883 344 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 PON1P27169 355 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 MAN1A1P33908 653 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 JAM2P57087 298 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 AMPD2Q01433 879 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 MYL7Q01449 175 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 POU5F1Q01860 360 aaKnown RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 TNFAIP2Q03169 654 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 POU5F1BQ06416 359 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 LAMTOR4Q0VGL1 99 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 STRN3Q13033 797 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 MXD4Q14582 209 aaPredicted RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 SNRNP35Q16560 246 aaKnown RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 DGKDQ16760 1214 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 EXOC3L4Q17RC7 722 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 CBWD6Q4V339 395 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 CBWD3Q5JTY5 395 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 CBWD5Q5RIA9 395 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 KLHDC7AQ5VTJ3 777 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 TRIM65Q6PJ69 517 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 ZPBP2Q6X784 338 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 GBP6Q6ZN66 633 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 LHFPL2Q6ZUX7 228 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 CCDC170Q8IYT3 715 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 FAM181AQ8N9Y4 354 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 ZNF397Q8NF99 534 aaPredicted RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 OR6J1Q8NGC5 347 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 DEPTORQ8TB45 409 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 PLEKHO2Q8TD55 490 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 PRPF31Q8WWY3 499 aaKnown RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 KCTD13Q8WZ19 329 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 DDX1Q92499 740 aaKnown RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 C16orf45Q96MC5 204 aaPredicted RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 FAM83CQ9BQN1 747 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 CRACR2AQ9BSW2 395 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 DESI2Q9BSY9 194 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 C2orf40Q9H1Z8 148 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 RNPEPQ9H4A4 650 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 MMRN2Q9H8L6 949 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 GCNT4Q9P109 453 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 REXO2Q9Y3B8 237 aaKnown RBP6.14□□□□□ -1.43
CHKA-208ENST00000533910 Q9Y3F1 56 aa6.14□□□□□ -1.43
CHKA-208ENST00000533910 PDCD11Q14690 1871 aaKnown RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 A0A0B4J269 797 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 SSU72P8A0A1W2PR75 194 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CFAP69A5D8W1 941 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 K7ERI5 159 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ABLIM1O14639 778 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ASAP2O43150 1006 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 EXTL3O43909 919 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 OPA1O60313 960 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms