RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PSMA7O14818 248 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 CETN3O15182 167 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 KRT13P13646 458 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 ARSAP15289 507 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 DRD1P21728 446 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 MPLP40238 635 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 GALK1P51570 392 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 TRPC3Q13507 836 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 ZNF268Q14587 947 aaPredicted RBP9.3□□□□□ -0.92
COPB1-210ENST00000533533 PDGFRLQ15198 375 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 NFE2Q16621 373 aaPredicted RBP9.3□□□□□ -0.92
COPB1-210ENST00000533533 PLK5Q496M5 336 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 FBXO43Q4G163 708 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 CC2D1AQ6P1N0 951 aaPredicted RBP9.3□□□□□ -0.92
COPB1-210ENST00000533533 CLEC17AQ6ZS10 378 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 MON1AQ86VX9 555 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 WDR49Q8IV35 697 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 SLC9A9Q8IVB4 645 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 FAM186BQ8IYM0 893 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 C1orf127Q8N9H9 656 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 SPATA20Q8TB22 786 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 RIN3Q8TB24 985 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 MRPS31Q92665 395 aaKnown RBP9.3□□□□□ -0.92
COPB1-210ENST00000533533 HHIPQ96QV1 700 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 CGRRF1Q99675 332 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 P2RY13Q9BPV8 354 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 LSM14BQ9BX40 385 aaKnown RBP9.3□□□□□ -0.92
COPB1-210ENST00000533533 CLSTN2Q9H4D0 955 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 SMOC1Q9H4F8 434 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 VPS45Q9NRW7 570 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 TMLHEQ9NVH6 421 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 POLR3BQ9NW08 1133 aaPredicted RBP9.3□□□□□ -0.92
COPB1-210ENST00000533533 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 ITGA11Q9UKX5 1188 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 CTNND2Q9UQB3 1225 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 TRAF3IP3Q9Y228 551 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 PCDHB5Q9Y5E4 795 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 HELZP42694 1942 aaKnown RBP9.3□□□□□ -0.92
COPB1-210ENST00000533533 ACACAQ13085 2346 aa9.3□□□□□ -0.92
COPB1-210ENST00000533533 TRIM49BA6NDI0 452 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 HUS1O60921 280 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 KCNK5O95279 499 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 CSH1P0DML2 217 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 CSH2P0DML3 217 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 EPB41P11171 864 aaKnown RBP9.29□□□□□ -0.92
COPB1-210ENST00000533533 GJA4P35212 333 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 PSMC2P35998 433 aaKnown RBP9.29□□□□□ -0.92
COPB1-210ENST00000533533 PPP1R2P41236 205 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 PNPLA4P41247 253 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 GPR15P49685 360 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
COPB1-210ENST00000533533 STX17P56962 302 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 TSPY1Q01534 308 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 MYO1EQ12965 1108 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 SDHAF4Q5VUM1 108 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 RNF43Q68DV7 783 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 NAIF1Q69YI7 327 aaPredicted RBP9.29□□□□□ -0.92
COPB1-210ENST00000533533 ANKRD40Q6AI12 368 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 SYT13Q7L8C5 426 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 TRAPPC11Q7Z392 1133 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 STKLD1Q8NE28 680 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 RPLP0P6Q8NHW5 317 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 NELFBQ8WX92 580 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 EXOC4Q96A65 974 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 HPDLQ96IR7 371 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 PI4K2AQ9BTU6 479 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 DUSP15Q9H1R2 295 aaPredicted RBP9.29□□□□□ -0.92
COPB1-210ENST00000533533 ECT2Q9H8V3 914 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 DMAC2Q9NW81 257 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 MAGED2Q9UNF1 606 aaPredicted RBP9.29□□□□□ -0.92
COPB1-210ENST00000533533 SNX9Q9Y5X1 595 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 DMXL2Q8TDJ6 3036 aa9.29□□□□□ -0.92
COPB1-210ENST00000533533 LRRIQ3A6PVS8 624 aaPredicted RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 DCLK1O15075 740 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 TADA3O75528 432 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 RHOBTB1O94844 696 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 APBB3O95704 486 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 TRIM49P0CI25 452 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 TRIM49CP0CI26 452 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 VAMP7P51809 220 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 PMS1P54277 932 aaKnown RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 RPL10AP62906 217 aaKnown RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 DLG4P78352 724 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 CREB5Q02930 508 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 MORC3Q14149 939 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 MTF1Q14872 753 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 ELF2Q15723 593 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 DDR2Q16832 855 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 EDRF1Q3B7T1 1238 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 CCDC40Q4G0X9 1142 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 DCAF17Q5H9S7 520 aaPredicted RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 TCERG1LQ5VWI1 586 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 SCARA3Q6AZY7 606 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 TCEAL6Q6IPX3 200 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 INTS8Q75QN2 995 aaKnown RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 CREBRFQ8IUR6 639 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 PDCL2Q8N4E4 241 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 CPA6Q8N4T0 437 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 LRRC52Q8N7C0 313 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 PLEKHO2Q8TD55 490 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms