RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 FAM81BQ96LP2 452 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 SLITRK1Q96PX8 696 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 SMOQ99835 787 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 IER2Q9BTL4 223 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 DUSP16Q9BY84 665 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 MFSD1Q9H3U5 465 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 FBXO44Q9H4M3 255 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 THAP9Q9H5L6 903 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 SLITRK6Q9H5Y7 841 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 C8orf33Q9H7E9 229 aaPredicted RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 MMRN2Q9H8L6 949 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 BRD9Q9H8M2 597 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 TBC1D17Q9HA65 648 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 TRPM5Q9NZQ8 1165 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 ARHGAP26Q9UNA1 814 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 MAGED2Q9UNF1 606 aaPredicted RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 USP3Q9Y6I4 520 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 MYO15AQ9UKN7 3530 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 CFAP54Q96N23 3096 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 FANCMQ8IYD8 2048 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 TRAV19A0A0A6YYK7 116 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 DPYSL4O14531 572 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 PI15O43692 258 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 AP1G2O75843 785 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 BEST1O76090 585 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 PRAMEF12O95522 483 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 MBD3O95983 291 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 AFPP02771 609 aaKnown RBP10.42□□□□□ -0.74
NUP98-220ENST00000533346 PAEPP09466 180 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 FAM200BP0CF97 657 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 HDCP19113 662 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 ACO1P21399 889 aaKnown RBP10.42□□□□□ -0.74
NUP98-220ENST00000533346 GDI1P31150 447 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 SLC5A3P53794 718 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 STX17P56962 302 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 TAF10Q12962 218 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 USP4Q13107 963 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 ZNF77Q15935 545 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 PPP1R26Q5T8A7 1209 aaPredicted RBP10.42□□□□□ -0.74
NUP98-220ENST00000533346 IER5LQ5T953 404 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 RALGPS2Q86X27 583 aaPredicted RBP10.42□□□□□ -0.74
NUP98-220ENST00000533346 CCDC105Q8IYK2 499 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 PJA1Q8NG27 643 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 GPT2Q8TD30 523 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 NT5C1BQ96P26 610 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 LTB4R2Q9NPC1 389 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 THG1LQ9NWX6 298 aaKnown RBP10.42□□□□□ -0.74
NUP98-220ENST00000533346 CA14Q9ULX7 337 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 MRPS17Q9Y2R5 130 aaKnown RBP10.42□□□□□ -0.74
NUP98-220ENST00000533346 SIT1Q9Y3P8 196 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.42□□□□□ -0.74
NUP98-220ENST00000533346 MYO16Q9Y6X6 1858 aa10.42□□□□□ -0.74
NUP98-220ENST00000533346 NCAM2O15394 837 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 VDRP11473 427 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 CCDC130P13994 396 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 PSEN1P49768 467 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 PTPN5P54829 565 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 TCF15Q12870 199 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 GRM2Q14416 872 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 PDGFRLQ15198 375 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 MEA1Q16626 185 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 DPCR1Q3MIW9 517 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 PKDCCQ504Y2 493 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 RAB41Q5JT25 222 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 KLHDC10Q6PID8 442 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 ZNF852Q6ZMS4 543 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 ENOSF1Q7L5Y1 443 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 YAF2Q8IY57 180 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 SCML4Q8N228 414 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 ANKRD52Q8NB46 1076 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 STKLD1Q8NE28 680 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 ST13P5Q8NFI4 369 aaPredicted RBP10.41□□□□□ -0.74
NUP98-220ENST00000533346 ENOX1Q8TC92 643 aaKnown RBP10.41□□□□□ -0.74
NUP98-220ENST00000533346 ARID3AQ99856 593 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 MED10Q9BTT4 135 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 CYLDQ9NQC7 956 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 HEBP1Q9NRV9 189 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 SCML2Q9UQR0 700 aa10.41□□□□□ -0.74
NUP98-220ENST00000533346 DMDP11532 3685 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 ZDBF2Q9HCK1 2354 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 C2orf78A6NCI8 922 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 CD58P19256 250 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 CDR1P51861 262 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 KIF11P52732 1056 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 ZNF132P52740 706 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 MAP3K7CLP57077 242 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 ZXDBP98169 803 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 RUNX3Q13761 415 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 MTF1Q14872 753 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 STILQ15468 1287 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 PM20D1Q6GTS8 502 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 CCDC186Q7Z3E2 898 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 DDX42Q86XP3 938 aaKnown RBP eCLIP10.4□□□□□ -0.74
NUP98-220ENST00000533346 FAM114A1Q8IWE2 563 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 ARL14EPQ8N8R7 260 aaPredicted RBP10.4□□□□□ -0.74
NUP98-220ENST00000533346 DTWD2Q8NBA8 298 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 FLCNQ8NFG4 579 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 SCAMP5Q8TAC9 235 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms