RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NCANO14594 1321 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 GTPBP10A4D1E9 387 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 SHISA7A6NL88 538 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 LGALS16A8MUM7 142 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 MAN2B1O00754 1011 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 DPYSL4O14531 572 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 SLC9A1P19634 815 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 RFX1P22670 979 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 TBXAS1P24557 533 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 GDI1P31150 447 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 AVPR1AP37288 418 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 GRIK1P39086 918 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 MAGEA9P43362 315 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 YWHAEP62258 255 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 INCA1Q0VD86 236 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 CUL2Q13617 745 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 ZNF268Q14587 947 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 SDHAF4Q5VUM1 108 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 ZNF852Q6ZMS4 543 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 YAF2Q8IY57 180 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 DTWD2Q8NBA8 298 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 BPIFB1Q8TDL5 484 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 LRRC3BQ96PB8 259 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 LSM14BQ9BX40 385 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 SDCBP2Q9H190 292 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 UBE2TQ9NPD8 197 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 HEBP1Q9NRV9 189 aa13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 MAGED2Q9UNF1 606 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 MRPS17Q9Y2R5 130 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-212ENST00000533058 F8VP50 259 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 NCAM2O15394 837 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 TADA3O75528 432 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 PRAMEF12O95522 483 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 PON1P27169 355 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 ANXA13P27216 316 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 FANCCQ00597 558 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 RRAGAQ7L523 313 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 ARHGEF19Q8IW93 802 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 TTC39CQ8N584 583 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 MAB21L3Q8N8X9 362 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 CLDN23Q96B33 292 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 ARID3AQ99856 593 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 B3GNT5Q9BYG0 378 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 LTB4R2Q9NPC1 389 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 TDP1Q9NUW8 608 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 THG1LQ9NWX6 298 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 PIEZO1Q92508 2521 aa13.72□□□□□ -0.21
TRAPPC4-212ENST00000533058 ATP8B3O60423 1300 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 FAM170BA6NMN3 283 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 TCF3P15923 654 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 RPS9P46781 194 aaKnown RBP13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 PDE6CP51160 858 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 NDST1P52848 882 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 MFAP3P55082 362 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 UBASH3AP57075 661 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 ORC1Q13415 861 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 TXNDC8Q6A555 127 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 TPRG1Q6ZUI0 275 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 PAQR9Q6ZVX9 377 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 ZNF687Q8N1G0 1237 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 KIAA1958Q8N8K9 716 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 LMO3Q8TAP4 145 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 USP13Q92995 863 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 FOXQ1Q9C009 403 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 ZNF518BQ9C0D4 1074 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 C8orf33Q9H7E9 229 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 COMMD8Q9NX08 183 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 IL37Q9NZH6 218 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 PCDHB4Q9Y5E5 795 aa13.71□□□□□ -0.21
TRAPPC4-212ENST00000533058 F5P12259 2224 aa13.71□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM92AA1XBS5 289 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 LRRC10BA6NIK2 292 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 RTN3O95197 1032 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 TPM3P06753 285 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 USP17L7P0C7H9 530 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 KRT5P13647 590 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 USP8P40818 1118 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 USP46P62068 366 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 APBA1Q02410 837 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 FZD5Q13467 585 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 RAPGEF1Q13905 1077 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 SYCP1Q15431 976 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 ARHGAP44Q17R89 818 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 GJB7Q6PEY0 223 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 ACOT1Q86TX2 421 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM35AQ86V20 835 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 FUKQ8N0W3 1084 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 NUP93Q8N1F7 819 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 STKLD1Q8NE28 680 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 NEK11Q8NG66 645 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 OVCA2Q8WZ82 227 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 KAT5Q92993 513 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms