RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 KRT16P08779 473 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 MBL2P11226 248 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 SLC11A2P49281 568 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 RAB27AP51159 221 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 DGKZQ13574 1117 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 SNX30Q5VWJ9 437 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 ZNF280DQ6N043 979 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 LUZP2Q86TE4 346 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 MRPS31Q92665 395 aaKnown RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 GOLPH3Q9H4A6 298 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 CYP39A1Q9NYL5 469 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 XPO7Q9UIA9 1087 aaKnown RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 PCDHB12Q9Y5F1 795 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 ADCY3O60266 1144 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 DIAPH2O60879 1101 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 AKAP3O75969 853 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 LHX1P48742 406 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 INPP5AQ14642 412 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 E2F5Q15329 346 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 C2CD6Q53TS8 623 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 MDH1BQ5I0G3 518 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 FBXO47Q5MNV8 452 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 NLRP9Q7RTR0 991 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 PLD3Q8IV08 490 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 KIAA2013Q8IYS2 634 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 SLC25A41Q8N5S1 370 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 ARL8AQ96BM9 186 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 DEPDC7Q96QD5 511 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 KIAA1257Q9ULG3 409 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 BAZ2BQ9UIF8 2168 aaKnown RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 EML1O00423 815 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 EGFRP00533 1210 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 PLEKP08567 350 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 UBA1P22314 1058 aaKnown RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 BCAT1P54687 386 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 USP39Q53GS9 565 aaKnown RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 PRAMEF19Q5SWL8 479 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 ICE2Q659A1 982 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 VPS50Q96JG6 964 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 ELAC2Q9BQ52 826 aaKnown RBP9.06□□□□□ -0.96
CTNND1-232ENST00000532649 KCNF1Q9H3M0 494 aa9.06□□□□□ -0.96
CTNND1-232ENST00000532649 LZTS3O60299 673 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 TBC1D4O60343 1298 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SLC2A3P11169 496 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 TMEM132BQ14DG7 1078 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 ALFQ53S48 1182 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 HORMAD1Q86X24 394 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 IPMKQ8NFU5 416 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 DIS3LQ8TF46 1054 aaKnown RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 RPRD1AQ96P16 312 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 GTF3C4Q9UKN8 822 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 GTF2A1LQ9UNN4 478 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 PKP3Q9Y446 797 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 IPPQ9Y573 584 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SLC30A1Q9Y6M5 507 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 ANGPT2O15123 496 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 CKMP06732 381 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 CYP11B1P15538 503 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 MZF1P28698 734 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 S100A5P33763 92 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 RPL10AP62906 217 aaKnown RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SP3Q02447 781 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 RALGDSQ12967 914 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 DYNC1I2Q13409 638 aaKnown RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 KLHL24Q6TFL4 600 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 PNMA5Q96PV4 448 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 CISHQ9NSE2 258 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 KANSL3Q9P2N6 904 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 ERVK-10P10266 1014 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 AP2B1P63010 937 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 COPS5Q92905 334 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 FAM162AQ96A26 154 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 ADNPQ9H2P0 1102 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 ITGA11Q9UKX5 1188 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 TIMM13Q9Y5L4 95 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SLIT3O75094 1523 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SYT17Q9BSW7 474 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 WDR18Q9BV38 432 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SENP6Q9GZR1 1112 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SYBUQ9NX95 663 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 SMARCAL1Q9NZC9 954 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 PAK5Q9P286 719 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 ZC3H7BQ9UGR2 993 aaKnown RBP9.05□□□□□ -0.96
CTNND1-232ENST00000532649 USP20Q9Y2K6 914 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 TRPV2Q9Y5S1 764 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 PIK3C2AO00443 1686 aa9.05□□□□□ -0.96
CTNND1-232ENST00000532649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ZBTB39O15060 712 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ERN1O75460 977 aaKnown RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 RBP3P10745 1247 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ZNF177Q13360 481 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 GPR142Q7Z601 462 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ZNF410Q86VK4 478 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ICA1LQ8NDH6 482 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms