RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 ZNF618Q5T7W0 954 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 DNAAF5Q86Y56 855 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 FAM71DQ8N9W8 422 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 BLOC1S5Q8TDH9 187 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 INTS9Q9NV88 658 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 PLIN4Q96Q06 1357 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 CCL16O15467 120 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 RRP9O43818 475 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 DDHD2O94830 711 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 MAP4P27816 1152 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TFB1MQ8WVM0 346 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 MYLPFQ96A32 169 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 RMDN2Q96LZ7 410 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 LATS2Q9NRM7 1088 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 KLHL14Q9P2G3 628 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 DLG5Q8TDM6 1919 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CASZ1Q86V15 1759 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 PSMD3O43242 534 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 ATP5C1P36542 298 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 BYSLQ13895 437 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CBWD6Q4V339 395 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CBWD3Q5JTY5 395 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CBWD5Q5RIA9 395 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 PSRC1Q6PGN9 363 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 ANGPTL8Q6UXH0 198 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TRIM48Q8IWZ4 208 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CELF6Q96J87 481 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 FAM84AQ96KN4 292 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 SERPINB11Q96P15 392 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 ZFATQ9P243 1243 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CDY1Q9Y6F8 540 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 A0A087X0T9 212 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 COPEO14579 308 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF185O15231 689 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF500O60304 480 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 FAM228BP0C875 321 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 OR1E1P30953 314 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 HADHAP40939 763 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TMPRSS15P98073 1019 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 MAP7Q14244 749 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TMEM63BQ5T3F8 832 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 DEFB106AQ8N104 65 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CCNYL1Q8N7R7 359 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 RNF217Q8TC41 542 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 SLC35C1Q96A29 364 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 FOPNLQ96NB1 174 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TCF25Q9BQ70 676 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TSSK1BQ9BXA7 367 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 EIF2AQ9BY44 585 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 MARCH2Q9P0N8 246 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TUBGCP4Q9UGJ1 667 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CRLS1Q9UJA2 301 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 MAFBQ9Y5Q3 323 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF189O75820 626 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 LSM8O95777 96 aaKnown RBP8.28□□□□□ -1.08
CTNND1-230ENST00000532245 CALCAP01258 141 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 NPAS4Q8IUM7 802 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 TC2NQ8N9U0 490 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 MID2Q9UJV3 735 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 USP18Q9UMW8 372 aa8.28□□□□□ -1.08
CTNND1-230ENST00000532245 A0A1W2PQ45 241 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-230ENST00000532245 A0A1W2PQY0 241 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 CFAP99D6REC4 459 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 F8VP50 259 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 STX7O15400 261 aaKnown RBP8.27□□□□□ -1.08
CTNND1-230ENST00000532245 OR4Q2P0C623 313 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 SCNN1BP51168 640 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 GNGT1P63211 74 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 CAV1Q03135 178 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 PPP3CAQ08209 521 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 E2F4Q16254 413 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 HIF1AQ16665 826 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 OR5B17Q8NGF7 314 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 WHAMMQ8TF30 809 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 SYN2Q92777 582 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-230ENST00000532245 TTC17Q96AE7 1141 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 CNPY3Q9BT09 278 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 CDH9Q9ULB4 789 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 CLCA2Q9UQC9 943 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 ALS2Q96Q42 1657 aa8.27□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF263O14978 683 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 CSH1P0DML2 217 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 CSH2P0DML3 217 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 TUBP50607 506 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 DUSP4Q13115 394 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 HECTD3Q5T447 861 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 FAXCQ5TGI0 409 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 PTRHD1Q6GMV3 140 aaKnown RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 GDF6Q6KF10 455 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 ARMC6Q6NXE6 501 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 RAD9BQ6WBX8 426 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 MFN1Q8IWA4 741 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 PTPRN2Q92932 1015 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 XPO7Q9UIA9 1087 aaKnown RBP8.27□□□□□ -1.09
CTNND1-230ENST00000532245 PRPF4O43172 522 aaKnown RBP eCLIP8.27□□□□□ -1.094e-8■□□□□ 10.4
CTNND1-230ENST00000532245 ARIH2O95376 493 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 GABRR2P28476 465 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 CCT5P48643 541 aa8.27□□□□□ -1.09
CTNND1-230ENST00000532245 ARHGAP1Q07960 439 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms