RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 ABCB6Q9NP58 842 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 POLR3BQ9NW08 1133 aaPredicted RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 ITGA11Q9UKX5 1188 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 ANAPC1Q9H1A4 1944 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 SPAG17Q6Q759 2223 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 TPRP12270 2363 aaKnown RBP19.06■□□□□ 0.64
PTPN11-204ENST00000531326 GREB1Q4ZG55 1949 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 SYCE3A1L190 88 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 SOBPA7XYQ1 873 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 GABRDO14764 452 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 EGFP01133 1207 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 TMEM191BP0C7N4 346 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 TNNI1P19237 187 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 VAMP7P51809 220 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 GRSF1Q12849 480 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTPN11-204ENST00000531326 ZNF268Q14587 947 aaPredicted RBP19.06■□□□□ 0.64
PTPN11-204ENST00000531326 DUOXA2Q1HG44 320 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 TRMT2BQ96GJ1 504 aaKnown RBP19.06■□□□□ 0.64
PTPN11-204ENST00000531326 ANKRD36BP1Q96IX9 119 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 MYRFLQ96LU7 910 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 SNX9Q9Y5X1 595 aa19.06■□□□□ 0.64
PTPN11-204ENST00000531326 KRT19P08727 400 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 TRIM49P0CI25 452 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 TRIM49CP0CI26 452 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 KRT13P13646 458 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 RPL10AP62906 217 aaKnown RBP19.05■□□□□ 0.64
PTPN11-204ENST00000531326 MYL7Q01449 175 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 SOWAHAQ2M3V2 549 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 ZSCAN23Q3MJ62 389 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 CFAP221Q4G0U5 840 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 TRAPPC11Q7Z392 1133 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 ADGRF2Q8IZF7 708 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 GAB3Q8WWW8 586 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 CYP2S1Q96SQ9 504 aa19.05■□□□□ 0.64
PTPN11-204ENST00000531326 UXTQ9UBK9 157 aaPredicted RBP19.05■□□□□ 0.64
PTPN11-204ENST00000531326 IKBKBO14920 756 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 RNF40O75150 1001 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 TNNC2P02585 160 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 C4BPAP04003 597 aaKnown RBP19.04■□□□□ 0.64
PTPN11-204ENST00000531326 ADRB1P08588 477 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 GJA4P35212 333 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 GALK1P51570 392 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 RBP5P82980 135 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 MTF1Q14872 753 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 ZNF77Q15935 545 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 CC2D1AQ6P1N0 951 aaPredicted RBP19.04■□□□□ 0.64
PTPN11-204ENST00000531326 LIMS2Q7Z4I7 341 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 TOP6BLQ8N6T0 577 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 SPATA18Q8TC71 538 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 EZH1Q92800 747 aaPredicted RBP19.04■□□□□ 0.64
PTPN11-204ENST00000531326 TRPC7Q9HCX4 862 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 MYO16Q9Y6X6 1858 aa19.04■□□□□ 0.64
PTPN11-204ENST00000531326 EPG5Q9HCE0 2579 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 KIAA1549LQ6ZVL6 1849 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 CCDC163A0A0D9SF12 145 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 AXIN1O15169 862 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 ATP2C2O75185 946 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 CCDC192P0DO97 292 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 LHX1P48742 406 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 AP3M2P53677 418 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 MARSP56192 900 aaKnown RBP19.03■□□□□ 0.64
PTPN11-204ENST00000531326 PPP3CAQ08209 521 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 USP4Q13107 963 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 PDGFRLQ15198 375 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 CCDC6Q16204 474 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 PPM1JQ5JR12 505 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 TDRD10Q5VZ19 366 aaKnown RBP19.03■□□□□ 0.64
PTPN11-204ENST00000531326 FAM171BQ6P995 826 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 KBTBD6Q86V97 674 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 IRF2BP1Q8IU81 584 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 SPATA2LQ8IUW3 424 aaPredicted RBP19.03■□□□□ 0.64
PTPN11-204ENST00000531326 ENOX1Q8TC92 643 aaKnown RBP19.03■□□□□ 0.64
PTPN11-204ENST00000531326 KBTBD7Q8WVZ9 684 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 FUBP3Q96I24 572 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPN11-204ENST00000531326 ARRDC1-AS1Q9H2J1 176 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 ECT2Q9H8V3 914 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 GCNT4Q9P109 453 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 ARMCX3Q9UH62 379 aaPredicted RBP19.03■□□□□ 0.64
PTPN11-204ENST00000531326 SLC8A2Q9UPR5 921 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 ACACBO00763 2458 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 LAMA1P25391 3075 aa19.03■□□□□ 0.64
PTPN11-204ENST00000531326 PTPRDP23468 1912 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 HELZP42694 1942 aaKnown RBP19.02■□□□□ 0.64
PTPN11-204ENST00000531326 C2orf78A6NCI8 922 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 ATG13O75143 517 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 RPP40O75818 363 aaKnown RBP19.02■□□□□ 0.64
PTPN11-204ENST00000531326 FGFR1OPO95684 399 aaKnown RBP19.02■□□□□ 0.64
PTPN11-204ENST00000531326 GNA14O95837 355 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 DRD1P21728 446 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 LMO2P25791 158 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 PCSK1P29120 753 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 RAP1GAPP47736 663 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 SF3A2Q15428 464 aaKnown RBP19.02■□□□□ 0.64
PTPN11-204ENST00000531326 ZACNQ401N2 412 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 CCDC40Q4G0X9 1142 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 ANO6Q4KMQ2 910 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 SV2AQ7L0J3 742 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 SCN4BQ8IWT1 228 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 ARL14EPQ8N8R7 260 aaPredicted RBP19.02■□□□□ 0.64
PTPN11-204ENST00000531326 OSCP1Q8WVF1 389 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms