RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PGM5Q15124 567 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 ACTRT1Q8TDG2 376 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 BLOC1S5Q8TDH9 187 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 GLT1D1Q96MS3 346 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 CYP3A43Q9HB55 503 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 CHORDC1Q9UHD1 332 aaPredicted RBP8.78□□□□□ -1
CTNND1-227ENST00000530748 SFMBT1Q9UHJ3 866 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 ZNF229Q9UJW7 825 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 TMX2Q9Y320 296 aa8.78□□□□□ -1
CTNND1-227ENST00000530748 WDR47O94967 919 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 PLEKP08567 350 aaPredicted RBP8.77□□□□□ -1
CTNND1-227ENST00000530748 PTPN7P35236 360 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 TROAPQ12815 778 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 SLC29A2Q14542 456 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 SRLQ86TD4 932 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 CBWD2Q8IUF1 395 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 CENPLQ8N0S6 344 aaPredicted RBP8.77□□□□□ -1
CTNND1-227ENST00000530748 MYO1HQ8N1T3 1032 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 IL17RAQ96F46 866 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 TBC1D13Q9NVG8 400 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 DTNAQ9Y4J8 743 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 TAF6LQ9Y6J9 622 aa8.77□□□□□ -1
CTNND1-227ENST00000530748 VWDEQ8N2E2 1590 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 MEGF6O75095 1541 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 VPS26AO75436 327 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 VIL1P09327 827 aaKnown RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 VCLP18206 1134 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 TCN1P20061 433 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 ANXA11P50995 505 aaKnown RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 HERVK_113P62684 666 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 RPL10AP62906 217 aaKnown RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 DDX42Q86XP3 938 aaKnown RBP eCLIP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 ERO1BQ86YB8 467 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 RPRD1AQ96P16 312 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 ILKAPQ9H0C8 392 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 STN1Q9H668 368 aaKnown RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 PHTF1Q9UMS5 762 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 ATP11BQ9Y2G3 1177 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 FOXN3O00409 490 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 TIMM44O43615 452 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 CRTAMO95727 393 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 MPOP05164 745 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 GSNP06396 782 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 KCNA3P22001 575 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 KCNJ1P48048 391 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 BTKQ06187 659 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 MTA1Q13330 715 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 CTXN3Q4LDR2 81 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 C11orf96Q7Z7L8 435 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 FICDQ9BVA6 458 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 TMBIM4Q9HC24 238 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 USP18Q9UMW8 372 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 KIDINS220Q9ULH0 1771 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 PPLO60437 1756 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 KRT87PA6NCN2 255 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 PRLRP16471 622 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 EPHB3P54753 998 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 LAMTOR4Q0VGL1 99 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 REXO1L1PQ8IX06 675 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 PCSK9Q8NBP7 692 aaKnown RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 ACER1Q8TDN7 264 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 HNRNPLLQ8WVV9 542 aaKnown RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 APBB2Q92870 758 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 ZNF333Q96JL9 665 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 PRMT6Q96LA8 375 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-227ENST00000530748 BRD8Q9H0E9 1235 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 ZCWPW1Q9H0M4 648 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 TNS2Q63HR2 1409 aa8.77□□□□□ -1.01
CTNND1-227ENST00000530748 PMPCBO75439 489 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 FGFR2P21802 821 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 CLCN3P51790 818 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 TMEM132BQ14DG7 1078 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 TMEM154Q6P9G4 183 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 TRIM69Q86WT6 500 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 GALNT4Q8N4A0 578 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 SEPT8Q92599 483 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 IL25Q9H293 177 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 KCTD10Q9H3F6 313 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 LRRC40Q9H9A6 602 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 AP4E1Q9UPM8 1137 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 DYRK1BQ9Y463 629 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 UBE2Q2LH0YL09 131 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 GUCA1CO95843 209 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 PSMA4P25789 261 aaKnown RBP8.76□□□□□ -1.01
CTNND1-227ENST00000530748 RAB27AP51159 221 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 ATXN3P54252 364 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-227ENST00000530748 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 TXNRD3Q86VQ6 643 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 EPS8L3Q8TE67 593 aaKnown RBP8.76□□□□□ -1.01
CTNND1-227ENST00000530748 DTNBP1Q96EV8 351 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 FAM111AQ96PZ2 611 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 UBXN6Q9BZV1 441 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 PRG3Q9Y2Y8 225 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-227ENST00000530748 IPPQ9Y573 584 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 DCCP43146 1447 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 F8VZ95 297 aa8.76□□□□□ -1.01
CTNND1-227ENST00000530748 IGF2BP3O00425 579 aaKnown RBP eCLIP8.76□□□□□ -1.01
CTNND1-227ENST00000530748 ADCY3O60266 1144 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms