RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 A0A1W2PQF6 199 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 CYSRT1A8MQ03 144 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 CER1O95813 267 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 ADH5P11766 374 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 NTSR1P30989 418 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 SUZ12Q15022 739 aaKnown RBP12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 SDE2Q6IQ49 451 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 DDX42Q86XP3 938 aaKnown RBP eCLIP12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 TMEM86AQ8N2M4 240 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 ZNF513Q8N8E2 541 aaPredicted RBP12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 STKLD1Q8NE28 680 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 OTUB2Q96DC9 234 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 PKMYT1Q99640 499 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 MSTO1Q9BUK6 570 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 TENM4Q6N022 2769 aa12.47□□□□□ -0.41
AMBRA1-207ENST00000529553 HNRNPDLO14979 420 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 FLRT2O43155 660 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 DTNBO60941 627 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 ATXN1LP0C7T5 689 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 HOXB2P14652 356 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 ABCD1P33897 745 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 TRAPPC10P48553 1259 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 MYL7Q01449 175 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 GAD2Q05329 585 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 LRRC69Q6ZNQ3 347 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 C12orf40Q86WS4 652 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 SPATA2LQ8IUW3 424 aaPredicted RBP12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 CADM4Q8NFZ8 388 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 PIP4K2CQ8TBX8 421 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 RHBDD1Q8TEB9 315 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 GAREM1Q9H706 876 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 CD248Q9HCU0 757 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 TM7SF3Q9NS93 570 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 GTF3C4Q9UKN8 822 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 CYP8B1Q9UNU6 501 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 CFAP46Q8IYW2 2715 aa12.46□□□□□ -0.41
AMBRA1-207ENST00000529553 DENND4CQ5VZ89 1909 aa12.46□□□□□ -0.42
AMBRA1-207ENST00000529553 MYO16Q9Y6X6 1858 aa12.46□□□□□ -0.42
AMBRA1-207ENST00000529553 ZNF462Q96JM2 2506 aa12.46□□□□□ -0.42
AMBRA1-207ENST00000529553 TEX51A0A1B0GUA7 166 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 RRP8O43159 456 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 TNFSF14O43557 240 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 HUS1O60921 280 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 OLFM2O95897 454 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 HLA-EP13747 358 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 EIF2S3P41091 472 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 MATKP42679 507 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 LHX1P48742 406 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 BTBD8Q5XKL5 378 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 VSTM1Q6UX27 236 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 TMPRSS12Q86WS5 348 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 ETFBKMTQ8IXQ9 262 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 PDCL2Q8N4E4 241 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 SYT2Q8N9I0 419 aaPredicted RBP12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 ZNF560Q96MR9 790 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 DUSP9Q99956 384 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 RNF38Q9H0F5 515 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 FOXP1Q9H334 677 aaPredicted RBP12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 DDX43Q9NXZ2 648 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 DEC1Q9P2X7 70 aa12.45□□□□□ -0.42
AMBRA1-207ENST00000529553 ZNF840PA6NDX5 716 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 HOXC11O43248 304 aaPredicted RBP12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 CILPO75339 1184 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 NDUFV2P19404 249 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 ITPKBP27987 946 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 PCSK1P29120 753 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 CD6P30203 668 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 CFHR1Q03591 330 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 KDSRQ06136 332 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 HLA-BQ31612 363 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 LY6G5CQ5SRR4 150 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 C4orf50Q6ZRC1 276 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 KCNK18Q7Z418 384 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 SCN4BQ8IWT1 228 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 ENGASEQ8NFI3 743 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 GABRG3Q99928 467 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 TTLL2Q9BWV7 592 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 PRDM16Q9HAZ2 1276 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 ZDHHC4Q9NPG8 344 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 CPQQ9Y646 472 aa12.44□□□□□ -0.42
AMBRA1-207ENST00000529553 ZNF638Q14966 1978 aaKnown RBP12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 ADAMTS9Q9P2N4 1935 aa12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 GFRA2O00451 464 aa12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 LAD1O00515 517 aa12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 GABRDO14764 452 aa12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 TULP3O75386 442 aa12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 MAOBP27338 520 aa12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 RAD51AP2Q09MP3 1159 aa12.43□□□□□ -0.42
AMBRA1-207ENST00000529553 PTPRNQ16849 979 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms