RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 PSD3Q9NYI0 1048 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 TRPC5OSA6NMA1 111 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 VWA5AO00534 786 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SOAT2O75908 522 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 WASHC5Q12768 1159 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 C4orf22Q6V702 233 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 FAM131BQ86XD5 332 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CCT7Q99832 543 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CEP41Q9BYV8 373 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CASTOR2A6NHX0 329 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 C2orf81A6NN90 581 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 C16orf96A6NNT2 1141 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 MTSS1O43312 755 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ZC3H11AO75152 810 aaKnown RBP eCLIP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CXCL8P10145 99 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SLC11A2P49281 568 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 RAP1GDS1P52306 607 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 FCGRTP55899 365 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 BACE1P56817 501 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 EFEMP1Q12805 493 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 PKN1Q16512 942 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 PCNX4Q63HM2 1172 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 OTOAQ7RTW8 1153 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ZNF720Q7Z2F6 126 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 RNF180Q86T96 592 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 UNC45BQ8IWX7 931 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ZSWIM2Q8NEG5 633 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 TATDN2Q93075 761 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 TUBGCP3Q96CW5 907 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 PLEKHA8Q96JA3 519 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ECSITQ9BQ95 431 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 TMBIM4Q9HC24 238 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 EXOSC4Q9NPD3 245 aaKnown RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 HPSEQ9Y251 543 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 USP20Q9Y2K6 914 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 DTNAQ9Y4J8 743 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 DAB1O75553 588 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 APOA1P02647 267 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 TFRCP02786 760 aaKnown RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SERPINB8P50452 374 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ZNF484Q5JVG2 852 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ZDHHC15Q96MV8 337 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 THUMPD3Q9BV44 507 aaKnown RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SPATA16Q9BXB7 569 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ILKAPQ9H0C8 392 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CDC42EP4Q9H3Q1 356 aaKnown RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 KBTBD4Q9NVX7 518 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 H2AFY2Q9P0M6 372 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ATP11BQ9Y2G3 1177 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 PIK3C2BO00750 1634 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 A0A087WZ62 844 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 GPR182O15218 404 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 EFCAB14O75071 495 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 GLRA3O75311 464 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 KRT16P08779 473 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ATP6V1B1P15313 513 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 MUTP22033 750 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 STIP1P31948 543 aaKnown RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 GTF2A2P52657 109 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 KCNMA1Q12791 1236 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SEC23AQ15436 765 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 NBPF20Q3BBV1 942 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 AGAP9Q5VTM2 703 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 C3orf67Q6ZVT6 689 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 KCTD17Q8N5Z5 321 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 GMCL1P1Q8NEA9 526 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 MAGEB18Q96M61 343 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 FDXACB1Q9BRP7 624 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CISHQ9NSE2 258 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 DCDC2Q9UHG0 476 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 AP4E1Q9UPM8 1137 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SPATA31A6Q5VVP1 1343 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 TMEM150BA6NC51 233 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 AP5Z1O43299 807 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 CYP2C8P10632 490 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 GYS1P13807 737 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 PGS1Q32NB8 556 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 ARHGAP15Q53QZ3 475 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 EARS2Q5JPH6 523 aaKnown RBP8.4□□□□□ -1.06
CTNND1-220ENST00000529526 DENND1BQ6P3S1 775 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 PAFAH2Q99487 392 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 COLEC11Q9BWP8 271 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 TIMM13Q9Y5L4 95 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-220ENST00000529526 ITSN1Q15811 1721 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 SDR42E2A6NKP2 422 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 LAMTOR4Q0VGL1 99 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 BMPR2Q13873 1038 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 RCN1Q15293 331 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 IYDQ6PHW0 289 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 NLRP9Q7RTR0 991 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 PLEKHH3Q7Z736 793 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 STRA8Q7Z7C7 330 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 ARHGEF19Q8IW93 802 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 CCDC60Q8IWA6 550 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-220ENST00000529526 TMEM176AQ96HP8 235 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 LACRTQ9GZZ8 138 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 PIH1D1Q9NWS0 290 aaKnown RBP8.4□□□□□ -1.06
CTNND1-220ENST00000529526 WHRNQ9P202 907 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms