RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SPDYCQ5MJ68 293 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 CCNI2Q6ZMN8 369 aaPredicted RBP20.31■□□□□ 0.84
SSRP1-204ENST00000529002 MARCH9Q86YJ5 346 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 PHTF2Q8N3S3 785 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 NAT16Q8N8M0 369 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 ADAMTS14Q8WXS8 1223 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 LRIG1Q96JA1 1093 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 LLPHQ9BRT6 129 aaKnown RBP20.31■□□□□ 0.84
SSRP1-204ENST00000529002 CCDC86Q9H6F5 360 aaKnown RBP20.31■□□□□ 0.84
SSRP1-204ENST00000529002 CALCOCO1Q9P1Z2 691 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 CFAP97Q9P2B7 532 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 HCN2Q9UL51 889 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 SNX9Q9Y5X1 595 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 STYXL1Q9Y6J8 313 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 KNL1Q8NG31 2342 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 AP5Z1O43299 807 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 ABL1P00519 1130 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 BDNFP23560 247 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 LMO2P25791 158 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 BYSLQ13895 437 aaKnown RBP20.3■□□□□ 0.84
SSRP1-204ENST00000529002 SLCO6A1Q86UG4 719 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 CEP76Q8TAP6 659 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 CXorf38Q8TB03 319 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 POMGNT1Q8WZA1 660 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 MYLPFQ96A32 169 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 CRELD1Q96HD1 420 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 CRTAC1Q9NQ79 661 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 DNAAF2Q9NVR5 837 aaKnown RBP20.3■□□□□ 0.84
SSRP1-204ENST00000529002 TRPM5Q9NZQ8 1165 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 LIMCH1Q9UPQ0 1083 aa20.3■□□□□ 0.84
SSRP1-204ENST00000529002 FLNBO75369 2602 aaKnown RBP20.3■□□□□ 0.84
SSRP1-204ENST00000529002 A0A0A0MRY4 1105 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 TRIM24O15164 1050 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 GJB3O75712 270 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 KRT18P05783 430 aaKnown RBP20.29■□□□□ 0.84
SSRP1-204ENST00000529002 HOXD12P35452 270 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 PNPLA4P41247 253 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 GRIA2P42262 883 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 DPP6P42658 865 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 SLC7A9P82251 487 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 LY6G5CQ5SRR4 150 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 FAM171BQ6P995 826 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 MIB1Q86YT6 1006 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 ADGRF2Q8IZF7 708 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 TRIML1Q8N9V2 468 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 SPRYD3Q8NCJ5 442 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 SAAL1Q96ER3 474 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 HSPA12BQ96MM6 686 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 CYP8B1Q9UNU6 501 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 PCDHB9Q9Y5E1 797 aa20.29■□□□□ 0.84
SSRP1-204ENST00000529002 IGHV1OR15-9A0A0B4J2B8 117 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 ZNF840PA6NDX5 716 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 GABRDO14764 452 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 KRT19P08727 400 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 ADH5P11766 374 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 MAOBP27338 520 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 GRIK1P39086 918 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 HMGN5P82970 282 aaKnown RBP20.28■□□□□ 0.84
SSRP1-204ENST00000529002 KCNA1Q09470 495 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 SOWAHAQ2M3V2 549 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 HSF5Q4G112 596 aaPredicted RBP20.28■□□□□ 0.84
SSRP1-204ENST00000529002 SLFN12LQ6IEE8 588 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 TMEM86AQ8N2M4 240 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 CSGALNACT2Q8N6G5 542 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 ZNF513Q8N8E2 541 aaPredicted RBP20.28■□□□□ 0.84
SSRP1-204ENST00000529002 FUBP3Q96I24 572 aaKnown RBP eCLIP20.28■□□□□ 0.84
SSRP1-204ENST00000529002 SYT15Q9BQS2 421 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 FAM213AQ9BRX8 229 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 SLC6A17Q9H1V8 727 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 MAGEC2Q9UBF1 373 aaPredicted RBP20.28■□□□□ 0.84
SSRP1-204ENST00000529002 SIX4Q9UIU6 781 aa20.28■□□□□ 0.84
SSRP1-204ENST00000529002 HELZ2Q9BYK8 2649 aaKnown RBP20.27■□□□□ 0.84
SSRP1-204ENST00000529002 TBC1D3BA6NDS4 549 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 IL18RAPO95256 599 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 MAGEA11P43364 429 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 TNFRSF4P43489 277 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 DENND5BQ6ZUT9 1274 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 NAXDQ8IW45 347 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 ACOX2Q99424 681 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 CABIN1Q9Y6J0 2220 aa20.27■□□□□ 0.84
SSRP1-204ENST00000529002 GOLGA8IPA6NC78 632 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 GOLGA8JA6NMD2 632 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 TBCAO75347 108 aaKnown RBP20.26■□□□□ 0.83
SSRP1-204ENST00000529002 OLFM2O95897 454 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 PDGFRBP09619 1106 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 MBL2P11226 248 aaPredicted RBP20.26■□□□□ 0.83
SSRP1-204ENST00000529002 EIF2DP41214 584 aaKnown RBP20.26■□□□□ 0.83
SSRP1-204ENST00000529002 PDE6CP51160 858 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 CYP27A1Q02318 531 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 IFRD2Q12894 506 aaPredicted RBP20.26■□□□□ 0.83
SSRP1-204ENST00000529002 PLEKHG6Q3KR16 790 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 MCTP1Q6DN14 999 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 SLC36A4Q6YBV0 504 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 NT5DC4Q86YG4 428 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 RGL4Q8IZJ4 473 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 KCTD17Q8N5Z5 321 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 KBTBD7Q8WVZ9 684 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 WBP2Q969T9 261 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 SPATA17Q96L03 361 aa20.26■□□□□ 0.83
SSRP1-204ENST00000529002 GDAP2Q9NXN4 497 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms