RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 BUB1O43683 1085 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 CYP1A2P05177 515 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 HAPLN1P10915 354 aaPredicted RBP26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 ADIGQ0VDE8 80 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 ARHGAP29Q52LW3 1261 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 VSTM1Q6UX27 236 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 CYP4F11Q9HBI6 524 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 GOLGA8SH3BPF8 625 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 CALB1P05937 261 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 KLRC2P26717 231 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 TKTL1P51854 596 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 TAF5Q15542 800 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 TPGS2Q68CL5 300 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 FAM183BPQ6ZVS7 135 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 C2orf15Q8WU43 125 aaKnown RBP26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 KCTD13Q8WZ19 329 aa26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 REV3LO60673 3130 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 PER2O15055 1255 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 MAGEA11P43364 429 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 CREMQ03060 361 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 MAMLD1Q13495 774 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 OR6B2Q6IFH4 312 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 IPO4Q8TEX9 1081 aaKnown RBP26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 EMILIN2Q9BXX0 1053 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 TRIM7Q9C029 511 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 LRRC4Q9HBW1 653 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 PTPRDP23468 1912 aa26.03■■□□□ 1.76
LDLRAD3-203ENST00000528989 TCRBV5S1A1TA0A578 114 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 TNFRSF10BO14763 440 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 KRT86O43790 486 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 MSNP26038 577 aaKnown RBP26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 IFRD2Q12894 506 aaPredicted RBP26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 RAB41Q5JT25 222 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 PPP1R2P3Q6NXS1 205 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 RBM23Q86U06 439 aaKnown RBP26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 NUP85Q9BW27 656 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 UBXN6Q9BZV1 441 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 CTTNBP2NLQ9P2B4 639 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 TRIOBPQ9H2D6 2365 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 MYO9BQ13459 2157 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 ADH1AP07327 375 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 MYBL1P10243 752 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 ATF6P18850 670 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 SLC5A3P53794 718 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 RPL7AP62424 266 aaKnown RBP26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 LIN9Q5TKA1 542 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 PLEKHA7Q6IQ23 1121 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 LILRA6Q6PI73 481 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 ZNF662Q6ZS27 426 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 GIPC2Q8TF65 315 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 C8orf48Q96LL4 319 aa26.02■■□□□ 1.76
LDLRAD3-203ENST00000528989 LPXNO60711 386 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 GRAP2O75791 330 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 USP17L7P0C7H9 530 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 NOP2P46087 812 aaKnown RBP26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 ZNF268Q14587 947 aaPredicted RBP26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 ADGRD2Q7Z7M1 963 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 MSANTD4Q8NCY6 345 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 RFFLQ8WZ73 363 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 TRIM11Q96F44 468 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 BTBD6Q96KE9 485 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 ULBP1Q9BZM6 244 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 STRIP2Q9ULQ0 834 aa26.01■■□□□ 1.75
LDLRAD3-203ENST00000528989 ESPNB1AK53 854 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 TRIM66O15016 1216 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 MOCS3O95396 460 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 ACADSBP45954 432 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 NAP1L1P55209 391 aaKnown RBP26■■□□□ 1.75
LDLRAD3-203ENST00000528989 RNASE9P60153 205 aaKnown RBP26■■□□□ 1.75
LDLRAD3-203ENST00000528989 USP46P62068 366 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 MTMR3Q13615 1198 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 OLFML1Q6UWY5 402 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 MCRS1Q96EZ8 462 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 TSGA10Q9BZW7 698 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 NCANO14594 1321 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 PRRG1O14668 218 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 LRIT3Q3SXY7 679 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 SIX6OS1Q8N1H7 587 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 C3orf20Q8ND61 904 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 KHSRPQ92945 711 aaKnown RBP eCLIP26■■□□□ 1.75
LDLRAD3-203ENST00000528989 ZNF576Q9H609 170 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 PNPLA8Q9NP80 782 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 CYLDQ9NQC7 956 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 AVENQ9NQS1 362 aaPredicted RBP26■■□□□ 1.75
LDLRAD3-203ENST00000528989 PARVAQ9NVD7 372 aa26■■□□□ 1.75
LDLRAD3-203ENST00000528989 CCP110O43303 1012 aa25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 ELF1P32519 619 aa25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 TUFMP49411 452 aaKnown RBP25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 CLCN4P51793 760 aa25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 FAM102AQ5T9C2 384 aaPredicted RBP25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 DNAJC24Q6P3W2 148 aa25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 TXLNBQ8N3L3 684 aa25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 JOSD2Q8TAC2 188 aa25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 METTL5Q9NRN9 209 aaKnown RBP25.99■■□□□ 1.75
LDLRAD3-203ENST00000528989 BTNL10A8MVZ5 291 aa25.98■■□□□ 1.75
LDLRAD3-203ENST00000528989 SLC6A3Q01959 620 aa25.98■■□□□ 1.75
LDLRAD3-203ENST00000528989 PPP1R15BQ5SWA1 713 aa25.98■■□□□ 1.75
LDLRAD3-203ENST00000528989 TCEAL8Q8IYN2 117 aa25.98■■□□□ 1.75
LDLRAD3-203ENST00000528989 EMC1Q8N766 993 aa25.98■■□□□ 1.75
LDLRAD3-203ENST00000528989 ZNF564Q8TBZ8 553 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms