RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TTLL2Q9BWV7 592 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
CAPN1-216ENST00000528739 CISHQ9NSE2 258 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 TMEM30AQ9NV96 361 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 SMPD4Q9NXE4 827 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 ARNTLO00327 626 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 CILPO75339 1184 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 BEST1O76090 585 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 ARSAP15289 507 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 YWHAEP62258 255 aaKnown RBP15.13■□□□□ 0.01
CAPN1-216ENST00000528739 AMPD2Q01433 879 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 CSTF1Q05048 431 aaKnown RBP15.13■□□□□ 0.01
CAPN1-216ENST00000528739 INCA1Q0VD86 236 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 PON2Q15165 354 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 PDGFRLQ15198 375 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 TTI2Q6NXR4 508 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 RALGPS2Q86X27 583 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-216ENST00000528739 ZC3H3Q8IXZ2 948 aaKnown RBP15.13■□□□□ 0.01
CAPN1-216ENST00000528739 KMT2EQ8IZD2 1858 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 TTC39CQ8N584 583 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 TRIML1Q8N9V2 468 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 TMEM176AQ96HP8 235 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 SMOQ99835 787 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 DUSP9Q99956 384 aaKnown RBP15.13■□□□□ 0.01
CAPN1-216ENST00000528739 GCNT4Q9P109 453 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 DLGAP2Q9P1A6 1054 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 CPQQ9Y646 472 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 WNT6Q9Y6F9 365 aa15.13■□□□□ 0.01
CAPN1-216ENST00000528739 COL4A3Q01955 1670 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 GNA14O95837 355 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 CCDC192P0DO97 292 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 ACO1P21399 889 aaKnown RBP15.12■□□□□ 0.01
CAPN1-216ENST00000528739 CTHP32929 405 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 FMO5P49326 533 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 SLC8A3P57103 927 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 NR1H3Q13133 447 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 LRRC32Q14392 662 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 HECTD3Q5T447 861 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 PPP1R26Q5T8A7 1209 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-216ENST00000528739 CPA6Q8N4T0 437 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 SLC35C1Q96A29 364 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 HNRNPABQ99729 332 aaKnown RBP15.12■□□□□ 0.01
CAPN1-216ENST00000528739 ARID3AQ99856 593 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 RNF38Q9H0F5 515 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 FBXO44Q9H4M3 255 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 RBM12Q9NTZ6 932 aaKnown RBP15.12■□□□□ 0.01
CAPN1-216ENST00000528739 GMIPQ9P107 970 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 ARHGAP26Q9UNA1 814 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 ZDBF2Q9HCK1 2354 aa15.12■□□□□ 0.01
CAPN1-216ENST00000528739 LEFTY2O00292 366 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 SCAMP3O14828 347 aaKnown RBP15.11■□□□□ 0.01
CAPN1-216ENST00000528739 CD19P15391 556 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 PFKLP17858 780 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 MLLT6P55198 1093 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-216ENST00000528739 CUL2Q13617 745 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 ZNF77Q15935 545 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 ZMIZ2Q8NF64 920 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 RIN3Q8TB24 985 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 OSCP1Q8WVF1 389 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 ATP2A3Q93084 1043 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 EXOC4Q96A65 974 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 CLDN23Q96B33 292 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 FAXDC2Q96IV6 333 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 NT5C1BQ96P26 610 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 GBP4Q96PP9 640 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 FAM83CQ9BQN1 747 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 HPS4Q9NQG7 708 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 TLR8Q9NR97 1041 aaKnown RBP15.11■□□□□ 0.01
CAPN1-216ENST00000528739 COMMD8Q9NX08 183 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.11■□□□□ 0.01
CAPN1-216ENST00000528739 R4GN57 208 aa15.11■□□□□ 0.01
CAPN1-216ENST00000528739 ZNF318Q5VUA4 2279 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 TNFRSF10BO14763 440 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 GFRA3O60609 400 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 SP9P0CG40 484 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 TBXAS1P24557 533 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-216ENST00000528739 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-216ENST00000528739 RPS9P46781 194 aaKnown RBP15.1■□□□□ 0.01
CAPN1-216ENST00000528739 KCNH2Q12809 1159 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 GRSF1Q12849 480 aaKnown RBP eCLIP15.1■□□□□ 0.01
CAPN1-216ENST00000528739 MTAPQ13126 283 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 PPP2R5DQ14738 602 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 ZC3H14Q6PJT7 736 aaKnown RBP15.1■□□□□ 0.01
CAPN1-216ENST00000528739 TXNDC11Q6PKC3 985 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 TSSK4Q6SA08 328 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 CLEC20AQ6ZU45 233 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 PPM1KQ8N3J5 372 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 OVCA2Q8WZ82 227 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 NKD2Q969F2 451 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-216ENST00000528739 DUSP16Q9BY84 665 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 NUP62CLQ9H1M0 184 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 LINC00597Q9H2U6 94 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 CLSTN2Q9H4D0 955 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 ECT2Q9H8V3 914 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 CSNK1G1Q9HCP0 422 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 CFAP97Q9P2B7 532 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 RWDD2AQ9UIY3 292 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 COQ4Q9Y3A0 265 aa15.1■□□□□ 0.01
CAPN1-216ENST00000528739 SH3BP1Q9Y3L3 701 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms