RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 DNAI2Q9GZS0 605 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 FOXD2O60548 495 aaPredicted RBP15.08■□□□□ 0
CAPN1-212ENST00000527887 VNN1O95497 513 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 OLFM2O95897 454 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 RETP07949 1114 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 YWHAQP27348 245 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 VAMP7P51809 220 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 CDH8P55286 799 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 USP46P62068 366 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 LMNB2Q03252 620 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 TAF10Q12962 218 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 SIM2Q14190 667 aaPredicted RBP15.08■□□□□ 0
CAPN1-212ENST00000527887 SNX30Q5VWJ9 437 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 CEP135Q66GS9 1140 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 KRBA2Q6ZNG9 492 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 CRYBG2Q8N1P7 616 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 CD101Q93033 1021 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 CHFRQ96EP1 664 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 SMARCD1Q96GM5 515 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 FAXDC2Q96IV6 333 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 ZNF518BQ9C0D4 1074 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 DPEP3Q9H4B8 488 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 SMYD3Q9H7B4 428 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 DMAP1Q9NPF5 467 aaPredicted RBP15.08■□□□□ 0
CAPN1-212ENST00000527887 DLL3Q9NYJ7 618 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 IL37Q9NZH6 218 aa15.08■□□□□ 0
CAPN1-212ENST00000527887 CACNA1AO00555 2505 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 LEFTY2O00292 366 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 HRO43593 1189 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 CLSTN1O94985 981 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 ZNF202O95125 648 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 ASS1P00966 412 aaKnown RBP15.07■□□□□ 0
CAPN1-212ENST00000527887 OAS1P00973 400 aaKnown RBP15.07■□□□□ 0
CAPN1-212ENST00000527887 KRT13P13646 458 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 FNTBP49356 437 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 MCCD1P59942 119 aaPredicted RBP15.07■□□□□ 0
CAPN1-212ENST00000527887 DLG4P78352 724 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 RMDN1Q96DB5 314 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 DUSP9Q99956 384 aaKnown RBP15.07■□□□□ 0
CAPN1-212ENST00000527887 MED10Q9BTT4 135 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 IMPG2Q9BZV3 1241 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 SLC8A2Q9UPR5 921 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 WNT6Q9Y6F9 365 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 DCHS1Q96JQ0 3298 aa15.07■□□□□ 0
CAPN1-212ENST00000527887 FAM92AA1XBS5 289 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 CLDN5O00501 218 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 AKAP3O75969 853 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 EGFP01133 1207 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 NR2F2P24468 414 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 GTF2H1P32780 548 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 PSMC2P35998 433 aaKnown RBP15.06■□□□□ 0
CAPN1-212ENST00000527887 TUBP50607 506 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 NFKBIBQ15653 356 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 FAM35AQ86V20 835 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 ADGRG2Q8IZP9 1017 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 FBXO32Q969P5 355 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 ACDQ96AP0 544 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 OTUB2Q96DC9 234 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 GTPBP4Q9BZE4 634 aaKnown RBP15.06■□□□□ 0
CAPN1-212ENST00000527887 RNF38Q9H0F5 515 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 FBXO44Q9H4M3 255 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 CYP3A43Q9HB55 503 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 CSNK1G1Q9HCP0 422 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 TBC1D14Q9P2M4 693 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 CPQQ9Y646 472 aa15.06■□□□□ 0
CAPN1-212ENST00000527887 E2F8A0AVK6 867 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 GOLGA6L22H0YM25 854 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 TNFRSF10BO14763 440 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 RNF40O75150 1001 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 AP1G2O75843 785 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 ABL1P00519 1130 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 TGM1P22735 817 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 EIF2DP41214 584 aaKnown RBP15.05■□□□□ -0
CAPN1-212ENST00000527887 PIK3CAP42336 1068 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 CACNA2D1P54289 1103 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 ZXDBP98169 803 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 DMWDQ09019 674 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 ADAM9Q13443 819 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 EDRF1Q3B7T1 1238 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 C1orf220Q5T0J3 134 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 HECTD3Q5T447 861 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 PRR23BQ6ZRT6 265 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 PAQR9Q6ZVX9 377 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 CEP68Q76N32 757 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 SYT13Q7L8C5 426 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 FAM186BQ8IYM0 893 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 FUKQ8N0W3 1084 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 TTC39CQ8N584 583 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 CCDC150Q8NCX0 1101 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 TTC16Q8NEE8 873 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 LOXL4Q96JB6 756 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 KCNK16Q96T55 309 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 LINC00597Q9H2U6 94 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 FAM124BQ9H5Z6 455 aaPredicted RBP15.05■□□□□ -0
CAPN1-212ENST00000527887 FBRSL1Q9HCM7 1045 aaKnown RBP15.05■□□□□ -0
CAPN1-212ENST00000527887 TMEM30AQ9NV96 361 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 RMND1Q9NWS8 449 aa15.05■□□□□ -0
CAPN1-212ENST00000527887 STX10O60499 249 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 HLA-DRAP01903 254 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 ZDHHC11BP0C7U3 371 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms