RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 EPB41P11171 864 aaKnown RBP20.46■□□□□ 0.87
CAPN1-211ENST00000527739 CCDC130P13994 396 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 PRCPP42785 496 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 NRLP54845 237 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 GRSF1Q12849 480 aaKnown RBP eCLIP20.46■□□□□ 0.87
CAPN1-211ENST00000527739 GAS6Q14393 721 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 ZNF77Q15935 545 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 OSCP1Q8WVF1 389 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 FBXO32Q969P5 355 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 DMAP1Q9NPF5 467 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-211ENST00000527739 FAM49BQ9NUQ9 324 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 SMPD4Q9NXE4 827 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 HMGXB4Q9UGU5 601 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 CHORDC1Q9UHD1 332 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-211ENST00000527739 PCDHA5Q9Y5H7 936 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 TICRRQ7Z2Z1 1910 aa20.46■□□□□ 0.87
CAPN1-211ENST00000527739 CD58P19256 250 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ADORA2BP29275 332 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ASPAP45381 313 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 EDRF1Q3B7T1 1238 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 WDR44Q5JSH3 913 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ZNF658Q5TYW1 1059 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ISM2Q6H9L7 571 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 PAQR9Q6ZVX9 377 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 UNC93AQ86WB7 457 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ENGASEQ8NFI3 743 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 SLC2A14Q8TDB8 520 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ATP2A3Q93084 1043 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 SMARCD1Q96GM5 515 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 GSDMAQ96QA5 445 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 RNF38Q9H0F5 515 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 LINC00597Q9H2U6 94 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ECT2Q9H8V3 914 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 KRT82Q9NSB4 513 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 ARHGAP26Q9UNA1 814 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 CEP250Q9BV73 2442 aa20.45■□□□□ 0.86
CAPN1-211ENST00000527739 COL4A2P08572 1712 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 LEFTY2O00292 366 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 MBL2P11226 248 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-211ENST00000527739 USP4Q13107 963 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 NR1H3Q13133 447 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 PUM1Q14671 1186 aaKnown RBP eCLIP20.44■□□□□ 0.86
CAPN1-211ENST00000527739 ZCWPW2Q504Y3 356 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 TCERG1LQ5VWI1 586 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 KRT39Q6A163 491 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 MAMSTRQ6ZN01 415 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 FUKQ8N0W3 1084 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 CRYBG2Q8N1P7 616 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 C12orf29Q8N999 325 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 ZBTB44Q8NCP5 570 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 SCAMP5Q8TAC9 235 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 NELL1Q92832 810 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 EXOC4Q96A65 974 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 FAM126AQ9BYI3 521 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-211ENST00000527739 APOBEC3GQ9HC16 384 aaKnown RBP20.44■□□□□ 0.86
CAPN1-211ENST00000527739 TMEM8AQ9HCN3 771 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 DLL3Q9NYJ7 618 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 CPQQ9Y646 472 aa20.44■□□□□ 0.86
CAPN1-211ENST00000527739 STX10O60499 249 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 PFKLP17858 780 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 GJA4P35212 333 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 GALK1P51570 392 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 SLC5A3P53794 718 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 MAP3K7CLP57077 242 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 CCINQ13939 588 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 RSPO4Q2I0M5 234 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-211ENST00000527739 HEATR6Q6AI08 1181 aaKnown RBP20.43■□□□□ 0.86
CAPN1-211ENST00000527739 SYNPOQ8N3V7 929 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 PDZD8Q8NEN9 1154 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 JAKMIP2Q96AA8 810 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 CHFRQ96EP1 664 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 P2RY13Q9BPV8 354 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 NT5C1AQ9BXI3 368 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 DNAI2Q9GZS0 605 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 NIF3L1Q9GZT8 377 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 CYP3A43Q9HB55 503 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 NCDNQ9UBB6 729 aa20.43■□□□□ 0.86
CAPN1-211ENST00000527739 TRDMT1O14717 391 aaKnown RBP20.42■□□□□ 0.86
CAPN1-211ENST00000527739 SCAMP3O14828 347 aaKnown RBP20.42■□□□□ 0.86
CAPN1-211ENST00000527739 LILRB5O75023 590 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 GTF2H1P32780 548 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 ENPEPQ07075 957 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 EML3Q32P44 896 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 DCAF17Q5H9S7 520 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-211ENST00000527739 TMEM196Q5HYL7 178 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 NAIF1Q69YI7 327 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-211ENST00000527739 ANKRD40Q6AI12 368 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 FSTL4Q6MZW2 842 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 TIGD1Q96MW7 591 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 TWNKQ96RR1 684 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 SMOQ99835 787 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 NACA2Q9H009 215 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 FBRSL1Q9HCM7 1045 aaKnown RBP20.42■□□□□ 0.86
CAPN1-211ENST00000527739 CFAP97Q9P2B7 532 aa20.42■□□□□ 0.86
CAPN1-211ENST00000527739 NUP210Q8TEM1 1887 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-211ENST00000527739 CHURC1-FNTBB4DL54 471 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 BEST1O76090 585 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 NFATC1O95644 943 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 EGFP01133 1207 aa20.41■□□□□ 0.86
CAPN1-211ENST00000527739 FAM200BP0CF97 657 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms