RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NUCB2P80303 420 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 LRRC32Q14392 662 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 EML3Q32P44 896 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 TMEM196Q5HYL7 178 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 DGKKQ5KSL6 1271 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 CC2D1AQ6P1N0 951 aaPredicted RBP11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 ZC3H14Q6PJT7 736 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 INTS8Q75QN2 995 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 C12orf29Q8N999 325 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 TTC16Q8NEE8 873 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 OSCP1Q8WVF1 389 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 ATRIPQ8WXE1 791 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 SMOQ99835 787 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 IER2Q9BTL4 223 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 MMRN2Q9H8L6 949 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 ECT2Q9H8V3 914 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 POLR3BQ9NW08 1133 aaPredicted RBP11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 IL37Q9NZH6 218 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
PRPF40B-204ENST00000527253 ANTXRLA6NF34 631 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 CHURC1-FNTBB4DL54 471 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 LEFTY2O00292 366 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 SCAMP3O14828 347 aaKnown RBP11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 KINO60870 393 aaKnown RBP11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 CLSTN1O94985 981 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 OAS1P00973 400 aaKnown RBP11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 EGFP01133 1207 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 RPL13P26373 211 aaKnown RBP11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 YWHAQP27348 245 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 GJA4P35212 333 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 PIK3CAP42336 1068 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 FNTBP49356 437 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 CCR3P51677 355 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 SLC7A9P82251 487 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 IFRD2Q12894 506 aaPredicted RBP11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 EDRF1Q3B7T1 1238 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 UNC93AQ86WB7 457 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 NUP93Q8N1F7 819 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 SLC2A14Q8TDB8 520 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 TNIP3Q96KP6 325 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 MED10Q9BTT4 135 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 FAM49BQ9NUQ9 324 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 SMPD4Q9NXE4 827 aa11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 CHORDC1Q9UHD1 332 aaPredicted RBP11.08□□□□□ -0.64
PRPF40B-204ENST00000527253 SDK1Q7Z5N4 2213 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 FAM92AA1XBS5 289 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 HRO43593 1189 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 AP1G2O75843 785 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 ABL1P00519 1130 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 ZDHHC11BP0C7U3 371 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 KRT13P13646 458 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 P4HA1P13674 534 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 PFKLP17858 780 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 PPP3CCP48454 512 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 IFNAR2P48551 515 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 SLC5A3P53794 718 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 ENPEPQ07075 957 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 INCA1Q0VD86 236 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 SRSF5Q13243 272 aaKnown RBP11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 COBLL1Q53SF7 1204 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 ZNF658Q5TYW1 1059 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 GPRIN1Q7Z2K8 1008 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 ZC3H3Q8IXZ2 948 aaKnown RBP11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 SYNPOQ8N3V7 929 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 FBXO32Q969P5 355 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 WBP2Q969T9 261 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 SMARCD1Q96GM5 515 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 ZFRQ96KR1 1074 aaKnown RBP11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 GSDMAQ96QA5 445 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 FAM126AQ9BYI3 521 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 EPC1Q9H2F5 836 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 TMEM8AQ9HCN3 771 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 CSNK1G1Q9HCP0 422 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 DMAP1Q9NPF5 467 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 KRT82Q9NSB4 513 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 GMIPQ9P107 970 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 CPQQ9Y646 472 aa11.07□□□□□ -0.64
PRPF40B-204ENST00000527253 HELZP42694 1942 aaKnown RBP11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 MYOFQ9NZM1 2061 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 HHLA1C9JL84 531 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CETN3O15182 167 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 COCHO43405 550 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 GADD45BO75293 160 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CILPO75339 1184 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 RTN3O95197 1032 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CD58P19256 250 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 BMP6P22004 513 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 ADORA2BP29275 332 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 GTF2H1P32780 548 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 MAP3K7CLP57077 242 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms