RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 KLF8O95600 359 aaPredicted RBP17.17■□□□□ 0.34
PTPRU-210ENST00000527027 ABL1P00519 1130 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 FAM163BP0C2L3 166 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 P2RY2P41231 377 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
PTPRU-210ENST00000527027 TAF10Q12962 218 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 MDH1BQ5I0G3 518 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 TDRD10Q5VZ19 366 aaKnown RBP17.17■□□□□ 0.34
PTPRU-210ENST00000527027 STXBP4Q6ZWJ1 553 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 LPCAT2Q7L5N7 544 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 HS2ST1Q7LGA3 356 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 TRAPPC11Q7Z392 1133 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 SFTPA1Q8IWL2 248 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 KDF1Q8NAX2 398 aaPredicted RBP17.17■□□□□ 0.34
PTPRU-210ENST00000527027 RLN3Q8WXF3 142 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 SLITRK1Q96PX8 696 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 KIAA1586Q9HCI6 787 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 POLMQ9NP87 494 aaPredicted RBP17.17■□□□□ 0.34
PTPRU-210ENST00000527027 SMPD4Q9NXE4 827 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 RALYQ9UKM9 306 aaKnown RBP17.17■□□□□ 0.34
PTPRU-210ENST00000527027 ZMIZ1Q9ULJ6 1067 aa17.17■□□□□ 0.34
PTPRU-210ENST00000527027 IGF2RP11717 2491 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 SGK1O00141 431 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 TNFRSF10BO14763 440 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 TACC1O75410 805 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 OAS1P00973 400 aaKnown RBP17.16■□□□□ 0.34
PTPRU-210ENST00000527027 CST3P01034 146 aaPredicted RBP17.16■□□□□ 0.34
PTPRU-210ENST00000527027 APODP05090 189 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
PTPRU-210ENST00000527027 PTPN1P18031 435 aaKnown RBP17.16■□□□□ 0.34
PTPRU-210ENST00000527027 SPINK2P20155 84 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 PDCP20941 246 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 TIE1P35590 1138 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 GRIA2P42262 883 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 TNFRSF4P43489 277 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 MESP2Q0VG99 397 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 LMAN2Q12907 356 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 UAP1L1Q3KQV9 507 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 EOGTQ5NDL2 527 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 EMC10Q5UCC4 262 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
PTPRU-210ENST00000527027 OR6B3Q8NGW1 331 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 WHAMMQ8TF30 809 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 SPACA7Q96KW9 195 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 FNBP1Q96RU3 617 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 MRPL45Q9BRJ2 306 aaKnown RBP17.16■□□□□ 0.34
PTPRU-210ENST00000527027 HSPBP1Q9NZL4 362 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 CFAP97Q9P2B7 532 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 TBC1D14Q9P2M4 693 aa17.16■□□□□ 0.34
PTPRU-210ENST00000527027 ANAPC1Q9H1A4 1944 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 A0A087X0B3 334 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 SCAMP3O14828 347 aaKnown RBP17.15■□□□□ 0.34
PTPRU-210ENST00000527027 ADH1CP00326 375 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 KIR2DL1P43626 348 aaPredicted RBP17.15■□□□□ 0.34
PTPRU-210ENST00000527027 RESTQ13127 1097 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 BYSLQ13895 437 aaKnown RBP17.15■□□□□ 0.34
PTPRU-210ENST00000527027 TRIM61Q5EBN2 209 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 SPDYCQ5MJ68 293 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 FAM173BQ6P4H8 233 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 C12orf40Q86WS4 652 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 SYT12Q8IV01 421 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 GLIS3Q8NEA6 775 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 NUSAP1Q9BXS6 441 aaKnown RBP17.15■□□□□ 0.34
PTPRU-210ENST00000527027 ADAM33Q9BZ11 813 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
PTPRU-210ENST00000527027 ARHGEF4Q9NR80 690 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 BCCIPQ9P287 314 aaKnown RBP eCLIP17.15■□□□□ 0.34
PTPRU-210ENST00000527027 CIZ1Q9ULV3 898 aaPredicted RBP17.15■□□□□ 0.34
PTPRU-210ENST00000527027 AKAP13Q12802 2813 aa17.15■□□□□ 0.34
PTPRU-210ENST00000527027 ASPMQ8IZT6 3477 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 SPEGQ15772 3267 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 E2F8A0AVK6 867 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-210ENST00000527027 TOP3BO95985 862 aaKnown RBP17.14■□□□□ 0.33
PTPRU-210ENST00000527027 MBL2P11226 248 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-210ENST00000527027 ADH5P11766 374 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 HOXD13P35453 343 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 PTGER3P43115 390 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 CACNA2D1P54289 1103 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 CUL4AQ13619 759 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 SLC39A14Q15043 492 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 MAP7D1Q3KQU3 841 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 LY6G5CQ5SRR4 150 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 PDILTQ8N807 584 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 FRMD1Q8N878 549 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 RDH13Q8NBN7 331 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 DEFB124Q8NES8 71 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 HPS3Q969F9 1004 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 SCNM1Q9BWG6 230 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 TMEM121BQ9BXQ6 578 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-210ENST00000527027 LRRC27Q9C0I9 530 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 ELOVL4Q9GZR5 314 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 TMEM74BQ9NUR3 256 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 TMEM30AQ9NV96 361 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 MBD1Q9UIS9 605 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-210ENST00000527027 NME7Q9Y5B8 376 aa17.14■□□□□ 0.33
PTPRU-210ENST00000527027 MORC2Q9Y6X9 1032 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms