RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 MS4A4AQ96JQ5 239 aa12.53□□□□□ -0.4
CHMP1B-201ENST00000526991 HEXIM2Q96MH2 286 aaKnown RBP12.53□□□□□ -0.4
CHMP1B-201ENST00000526991 MAF1Q9H063 256 aa12.53□□□□□ -0.4
CHMP1B-201ENST00000526991 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
CHMP1B-201ENST00000526991 CACNG4Q9UBN1 327 aa12.53□□□□□ -0.4
CHMP1B-201ENST00000526991 C2orf71A6NGG8 1288 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 H3BRB1 525 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 M0QYV0 167 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 HCRTO43612 131 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 TMEM63AO94886 807 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 CBX6O95503 412 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 SNAI1O95863 264 aaPredicted RBP12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 EZRP15311 586 aaKnown RBP12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 SMPD1P17405 629 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 RFC5P40937 340 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 LMNB2Q03252 620 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 IER5Q5VY09 327 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 IGDCC3Q8IVU1 814 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 C12orf29Q8N999 325 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 NPLOC4Q8TAT6 608 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 LRRC8CQ8TDW0 803 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 CPT1BQ92523 772 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 TRIM56Q9BRZ2 755 aaKnown RBP12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 CDT1Q9H211 546 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 ERAP1Q9NZ08 941 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 LGALS13Q9UHV8 139 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 HEY1Q9Y5J3 304 aa12.52□□□□□ -0.4
CHMP1B-201ENST00000526991 CLUHO75153 1309 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 PIGRP01833 764 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 MIPP30301 263 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 MCCD1P59942 119 aaPredicted RBP12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 EIF3EP60228 445 aaKnown RBP12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 BNIP1Q12981 228 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 PIGHQ14442 188 aaPredicted RBP12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 MTFR1Q15390 333 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 FAM102AQ5T9C2 384 aaPredicted RBP12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 GPR142Q7Z601 462 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 IFT122Q9HBG6 1241 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 KLK14Q9P0G3 267 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 SLC17A7Q9P2U7 560 aa12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 XPO7Q9UIA9 1087 aaKnown RBP12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
CHMP1B-201ENST00000526991 TCRBV5S1A1TA0A578 114 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 FAM155BO75949 473 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 ASMTLO95671 621 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 ERFP50548 548 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 SPARCL1Q14515 664 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 ZNF667Q5HYK9 610 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 JADE1Q6IE81 842 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 ANKRD36BP1Q96IX9 119 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 OSMRQ99650 979 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 WDR83Q9BRX9 315 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 CNTN6Q9UQ52 1028 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 NR2E3Q9Y5X4 410 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 RBP3P10745 1247 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 ARF4P18085 180 aaPredicted RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 KDELR1P24390 212 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 YY1P25490 414 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 GBP2P32456 591 aaPredicted RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 PREPLQ4J6C6 727 aaPredicted RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 LDLRAD1Q5T700 205 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 FAM210AQ96ND0 272 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 MPHOSPH6Q99547 160 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 MAGEB5Q9BZ81 275 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 MROH8Q9H579 483 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 TMEM134Q9H6X4 195 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 SIX4Q9UIU6 781 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 C3orf70A6NLC5 250 aaPredicted RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 C22orf31O95567 290 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 STAG3L1P0CL83 205 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 RAD23BP54727 409 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 CDH6P55285 790 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 HUNKP57058 714 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 YWHAGP61981 247 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 SLC25A11Q02978 314 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 MBTD1Q05BQ5 628 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 MORF4L2Q15014 288 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 GALNTL6Q49A17 601 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 OR6B2Q6IFH4 312 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 UBR7Q8N806 425 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 C1orf127Q8N9H9 656 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 PAFAH2Q99487 392 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 RPF1Q9H9Y2 349 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHMP1B-201ENST00000526991 PRKAG3Q9UGI9 489 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 222.8 ms