RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PDLIM2Q96JY6 352 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 CPXM1Q96SM3 734 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 LHX5Q9H2C1 402 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 SFXN1Q9H9B4 322 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 NHEJ1Q9H9Q4 299 aaPredicted RBP14.47□□□□□ -0.09
CD44-224ENST00000526669 ZNF334Q9HCZ1 680 aaPredicted RBP14.47□□□□□ -0.09
CD44-224ENST00000526669 CLEC1BQ9P126 229 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 DPP7Q9UHL4 492 aa14.47□□□□□ -0.09
CD44-224ENST00000526669 C5orf42Q9H799 3197 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 MYOFQ9NZM1 2061 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 SOWAHDA6NJG2 315 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 E5RJQ4 531 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 TNFRSF10BO14763 440 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 GABBR2O75899 941 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 C1RP00736 705 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 CSH1P0DML2 217 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 CSH2P0DML3 217 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 LTBRP36941 435 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 NTHL1P78549 312 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 CTC1Q2NKJ3 1217 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 CYP4A22Q5TCH4 519 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 TMEM184AQ6ZMB5 413 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 TRIM72Q6ZMU5 477 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 PHLDB2Q86SQ0 1253 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 NUP93Q8N1F7 819 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 CLEC4CQ8WTT0 213 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 NDRG1Q92597 394 aaKnown RBP14.46□□□□□ -0.09
CD44-224ENST00000526669 ZNF707Q96C28 371 aaPredicted RBP14.46□□□□□ -0.09
CD44-224ENST00000526669 PABPC5Q96DU9 382 aaKnown RBP14.46□□□□□ -0.09
CD44-224ENST00000526669 PPP1R13BQ96KQ4 1090 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 SPATA17Q96L03 361 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 ZNF512Q96ME7 567 aaPredicted RBP14.46□□□□□ -0.09
CD44-224ENST00000526669 CORO1BQ9BR76 489 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 C11orf70Q9BRQ4 267 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 PRKD2Q9BZL6 878 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 ULBP1Q9BZM6 244 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 MIS12Q9H081 205 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 PIDD1Q9HB75 910 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 LRRC4Q9HBW1 653 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 SPTLC3Q9NUV7 552 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 ZDHHC7Q9NXF8 308 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 ADAMTS1Q9UHI8 967 aa14.46□□□□□ -0.09
CD44-224ENST00000526669 BZW2Q9Y6E2 419 aaKnown RBP14.46□□□□□ -0.09
CD44-224ENST00000526669 SPTBN5Q9NRC6 3674 aaKnown RBP14.46□□□□□ -0.1
CD44-224ENST00000526669 KIF26AQ9ULI4 1882 aaPredicted RBP14.46□□□□□ -0.1
CD44-224ENST00000526669 A0A087X0T9 212 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 H3BQ06 376 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 AKR1B10O60218 316 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 XYLBO75191 536 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 LSM8O95777 96 aaKnown RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 ERBB2P04626 1255 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 HNRNPA1P09651 372 aaKnown RBP eCLIP14.45□□□□□ -0.1
CD44-224ENST00000526669 USP17L7P0C7H9 530 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 FAM228BP0C875 321 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 MYL4P12829 197 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 UNGP13051 313 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 HOXA9P31269 272 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 CDH5P33151 784 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 TKTL1P51854 596 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 KIF11P52732 1056 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 GFPT1Q06210 699 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 MTF1Q14872 753 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 OR6B2Q6IFH4 312 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 CYP26C1Q6V0L0 522 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 MMS22LQ6ZRQ5 1243 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 GRASPQ7Z6J2 395 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 DNAJB7Q7Z6W7 309 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 VPS36Q86VN1 386 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 ERICH1Q86X53 443 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 TMEM139Q8IV31 216 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 SIX6OS1Q8N1H7 587 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 FBXO32Q969P5 355 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 PSMG2Q969U7 264 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 CCDC42Q96M95 316 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 NOX5Q96PH1 765 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 BAG1Q99933 345 aaPredicted RBP14.45□□□□□ -0.1
CD44-224ENST00000526669 SYNCQ9H7C4 482 aa14.45□□□□□ -0.1
CD44-224ENST00000526669 PRUNE2Q8WUY3 3088 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 SSU72P8A0A1W2PR75 194 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 NRG2O14511 850 aaPredicted RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 ATMINO43313 823 aaPredicted RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 NCK2O43639 380 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 RTN3O95197 1032 aaPredicted RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 HMGA1P17096 107 aaKnown RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 GJA1P17302 382 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 FECHP22830 423 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 YWHAQP27348 245 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 NSFP46459 744 aaKnown RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 CDK17Q00537 523 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 CENPCQ03188 943 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 ASTE1Q2TB18 679 aaPredicted RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 RAB41Q5JT25 222 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 CCDC122Q5T0U0 273 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 ACAD10Q6JQN1 1059 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 FAM183BPQ6ZVS7 135 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 ITIH5Q86UX2 942 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 TMC8Q8IU68 726 aa14.44□□□□□ -0.1
CD44-224ENST00000526669 IPO4Q8TEX9 1081 aaKnown RBP14.44□□□□□ -0.1
CD44-224ENST00000526669 KCTD13Q8WZ19 329 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms