RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 OGDHLQ9ULD0 1010 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 LAMA3Q16787 3333 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 TRIOBPQ9H2D6 2365 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 CCDC196A0A1B0GTZ2 297 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 TCRBV16S1A1N1A0A5B0 115 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 PMS2P1A4D2B8 440 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 DNM1LO00429 736 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 MAFO75444 373 aaPredicted RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 ASGR1P07306 291 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 IFNAR1P17181 557 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 EDNRBP24530 442 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 MARK3P27448 753 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 MRPS9P82933 396 aaKnown RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 FOXL1Q12952 345 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 UTP14CQ5TAP6 766 aaKnown RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 CPLX2Q6PUV4 134 aaKnown RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 TRMT1LQ7Z2T5 733 aaKnown RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 RNF180Q86T96 592 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 NSUN7Q8NE18 718 aaKnown RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 CYP2W1Q8TAV3 490 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 THAP3Q8WTV1 239 aaPredicted RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 SCFD2Q8WU76 684 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 AFG1LQ8WV93 481 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 MPHOSPH6Q99547 160 aaKnown RBP5.83□□□□□ -1.48
SVIP-202ENST00000525670 SPC25Q9HBM1 224 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 RIC8AQ9NPQ8 531 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 STARD7Q9NQZ5 370 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 LTBP2Q14767 1821 aa5.83□□□□□ -1.48
SVIP-202ENST00000525670 H0YGN5 161 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 CTAGE5O15320 804 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 PRPF3O43395 683 aaKnown RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 EPB41L2O43491 1005 aaKnown RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 CHMP2AO43633 222 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 HIP1RO75146 1068 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 DUSP11O75319 330 aaKnown RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 CDKL5O76039 1030 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 DEXIO95424 95 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 TDP2O95551 362 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 MMP3P08254 477 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 APEX1P27695 318 aaKnown RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 ACLYP53396 1101 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 RCAN1P53805 252 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 SP2Q02086 613 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 HGFACQ04756 655 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 ARHGAP1Q07960 439 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 KLF10Q13118 480 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 RABEP1Q15276 862 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 ANKRD1Q15327 319 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 DUSP28Q4G0W2 176 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 TMEM177Q53S58 311 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 EARS2Q5JPH6 523 aaKnown RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 PIK3AP1Q6ZUJ8 805 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 UBE2Q1Q7Z7E8 422 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 C1orf210Q8IVY1 113 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 GPR135Q8IZ08 494 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 MSL3Q8N5Y2 521 aaKnown RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 IGSF22Q8N9C0 903 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 CCDC148Q8NFR7 591 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 ZBTB10Q96DT7 871 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 ZNF274Q96GC6 653 aaPredicted RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 SPATA33Q96N06 139 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 RNF26Q9BY78 433 aaPredicted RBP5.82□□□□□ -1.48
SVIP-202ENST00000525670 CSRNP2Q9H175 543 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 C6orf50Q9HD87 102 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 PNMA2Q9UL42 364 aa5.82□□□□□ -1.48
SVIP-202ENST00000525670 FRMPD4Q14CM0 1322 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 UMODL1Q5DID0 1318 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 SCN5AQ14524 2016 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 TRIP12Q14669 1992 aaPredicted RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 B4DLN1 442 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 ATP9AO75110 1047 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 GH1P01241 217 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 ARP10275 920 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 FDPSP14324 419 aaKnown RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 IBSPP21815 317 aaPredicted RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 ACRV1P26436 265 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 MSX2P35548 267 aaPredicted RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 STAT5BP51692 787 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 MRPL12P52815 198 aaKnown RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 TLE2Q04725 743 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 TRAF1Q13077 416 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 MTMR1Q13613 665 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 GRM7Q14831 915 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 HSDL1Q3SXM5 330 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 PRR16Q569H4 304 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 CATSPEREQ5SY80 951 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 ABHD17CQ6PCB6 329 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 BRAPQ7Z569 592 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 FGD2Q7Z6J4 655 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 ADGRE4PQ86SQ3 457 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 DHX37Q8IY37 1157 aaKnown RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 FAM184AQ8NB25 1140 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 OR14K1Q8NGZ2 314 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 MORC4Q8TE76 937 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 TBCKQ8TEA7 893 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 CCDC12Q8WUD4 166 aaPredicted RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 GLT1D1Q96MS3 346 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 HTATIP2Q9BUP3 242 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 TRPV6Q9H1D0 765 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms