RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 SLC2A14Q8TDB8 520 aa8.63□□□□□ -1.03
CHD7-203ENST00000525508 TRIM4Q9C037 500 aa8.63□□□□□ -1.03
CHD7-203ENST00000525508 ABHD16BQ9H3Z7 469 aa8.63□□□□□ -1.03
CHD7-203ENST00000525508 DEPDC5O75140 1603 aa8.63□□□□□ -1.03
CHD7-203ENST00000525508 F8W8V4 182 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 MBL2P11226 248 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 SLC12A3P55017 1021 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 CORO7P57737 925 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 PDCD2Q16342 344 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 VSIG10LQ86VR7 867 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ELOA2Q8IYF1 753 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 DDI1Q8WTU0 396 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 KRT35Q92764 455 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 FUT8Q9BYC5 575 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 PABPC3Q9H361 631 aaKnown RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 XPNPEP3Q9NQH7 507 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SUFUQ9UMX1 484 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 PCDHGB4Q9UN71 923 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 USP15Q9Y4E8 981 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 TMEM247A6NEH6 219 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 B2RBV5 119 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 F8VP50 259 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SUPT7LO94864 414 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ASS1P00966 412 aaKnown RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 LRG1P02750 347 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 TGFB3P10600 412 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 BTKQ06187 659 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 CYTH1Q15438 398 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ABRAQ8N0Z2 381 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 DNERQ8NFT8 737 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 GTF3C2Q8WUA4 911 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 MTMR9Q96QG7 549 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 CDC42EP4Q9H3Q1 356 aaKnown RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 GPRC5DQ9NZD1 345 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SENP1Q9P0U3 644 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 STOML1Q9UBI4 398 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 TRIM17Q9Y577 477 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ITSN1Q15811 1721 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 A8MX80 341 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 PROSCO94903 275 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 MAP4P27816 1152 aaKnown RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 ABCG1P45844 678 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 PPP3CCP48454 512 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 AARSP49588 968 aaKnown RBP eCLIP8.62□□□□□ -1.03
CHD7-203ENST00000525508 SCNN1BP51168 640 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ACVR2BQ13705 512 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 POU6F1Q14863 301 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ATP13A4Q4VNC1 1196 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 OVOS1Q6IE37 1185 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 MFSD7Q6UXD7 560 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 TMC2Q8TDI7 906 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ZBTB10Q96DT7 871 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 TLR10Q9BXR5 811 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 MTIF3Q9H2K0 278 aaKnown RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 CYP39A1Q9NYL5 469 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SMG5Q9UPR3 1016 aaKnown RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 TRAF3IP3Q9Y228 551 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 MROH2AA6NES4 1674 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ASTN2O75129 1339 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 O00370 1275 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 CXCL11O14625 94 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 RECQL4O94761 1208 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 RHOBTB1O94844 696 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 ZSCAN5DPP0CG00 497 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 GZMAP12544 262 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 AMPD1P23109 780 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 INPP1P49441 399 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 BCAT1P54687 386 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SNRPFP62306 86 aaKnown RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 ZNF177Q13360 481 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 TMEM132BQ14DG7 1078 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 EML3Q32P44 896 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SYTL3Q4VX76 610 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 FIGNQ5HY92 759 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 FAM171A1Q5VUB5 890 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SYDE1Q6ZW31 735 aaPredicted RBP8.62□□□□□ -1.03
CHD7-203ENST00000525508 LRRC34Q8IZ02 419 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 CARNMT1Q8N4J0 409 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 SYT15Q9BQS2 421 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 CNPY3Q9BT09 278 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 RNF208Q9H0X6 261 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 NT5MQ9NPB1 228 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 GAKO14976 1311 aa8.62□□□□□ -1.03
CHD7-203ENST00000525508 TBKBP1A7MCY6 615 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 ANGPT2O15123 496 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 CCDC22O60826 627 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 MYL2P10916 166 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 CCDC130P13994 396 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 STIP1P31948 543 aaKnown RBP8.61□□□□□ -1.03
CHD7-203ENST00000525508 SH3BGRP55822 239 aaPredicted RBP8.61□□□□□ -1.03
CHD7-203ENST00000525508 UGP2Q16851 508 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 TMEM119Q4V9L6 283 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 WDR59Q6PJI9 974 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 C1orf186Q6ZWK4 172 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 WDR49Q8IV35 697 aa8.61□□□□□ -1.03
CHD7-203ENST00000525508 MCOLN2Q8IZK6 566 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms