RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 GOLGA7BQ2TAP0 167 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 GET4Q7L5D6 327 aaPredicted RBP13.07□□□□□ -0.32
CCS-202ENST00000525435 CACNA2D4Q7Z3S7 1137 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 TMEM150AQ86TG1 271 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 PIGZQ86VD9 579 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 TTC30AQ86WT1 665 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 NPAS3Q8IXF0 933 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 GJD3Q8N144 294 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 SCML4Q8N228 414 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 RNF214Q8ND24 703 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 MRPS31Q92665 395 aaKnown RBP13.07□□□□□ -0.32
CCS-202ENST00000525435 E2F7Q96AV8 911 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 MYADMQ96S97 322 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 COL25A1Q9BXS0 654 aaPredicted RBP13.07□□□□□ -0.32
CCS-202ENST00000525435 TRPV4Q9HBA0 871 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 CYLDQ9NQC7 956 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 TRPM5Q9NZQ8 1165 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 IGSF9Q9P2J2 1179 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 AJAP1Q9UKB5 411 aaPredicted RBP13.07□□□□□ -0.32
CCS-202ENST00000525435 PCDHGC3Q9UN70 934 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 MAGED2Q9UNF1 606 aaPredicted RBP13.07□□□□□ -0.32
CCS-202ENST00000525435 SCML2Q9UQR0 700 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 USP3Q9Y6I4 520 aa13.07□□□□□ -0.32
CCS-202ENST00000525435 A0A1W2PRU2 124 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 ZNF840PA6NDX5 716 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 C2CD4DB7Z1M9 353 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 ANHXE9PGG2 379 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 EPHB6O15197 1021 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 THAP12O43422 761 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 CYP11B1P15538 503 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
CCS-202ENST00000525435 KRT9P35527 623 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 GPD2P43304 727 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 RPL34P49207 117 aaKnown RBP13.06□□□□□ -0.32
CCS-202ENST00000525435 PSEN1P49768 467 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 TUBP50607 506 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 SNX16P57768 344 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 USP46P62068 366 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 PDE4CQ08493 712 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 TAF10Q12962 218 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 TEAD2Q15562 447 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 MTSS1LQ765P7 747 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 SLC47A2Q86VL8 602 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
CCS-202ENST00000525435 NUCKS1Q9H1E3 243 aaKnown RBP13.06□□□□□ -0.32
CCS-202ENST00000525435 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
CCS-202ENST00000525435 A0A1W2PQJ5 194 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 M0QYV0 167 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 CEBPBP17676 345 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 ACADSBP45954 432 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 PM20D1Q6GTS8 502 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 CCDC186Q7Z3E2 898 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 SCAMP5Q8TAC9 235 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 UBA3Q8TBC4 463 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 SMARCD2Q92925 531 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 MCRS1Q96EZ8 462 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 ASB16Q96NS5 453 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 NOX5Q96PH1 765 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
CCS-202ENST00000525435 LIMD1Q9UGP4 676 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 CEP83Q9Y592 693 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCS-202ENST00000525435 ITIH6Q6UXX5 1313 aa13.05□□□□□ -0.32
CCS-202ENST00000525435 ECI2O75521 394 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 FBXO21O94952 628 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 FERP16591 822 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 TKTL1P51854 596 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 GPR158Q5T848 1215 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 PMF1Q6P1K2 205 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 TMEM110Q86TL2 294 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 KIAA1958Q8N8K9 716 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 ZNF397Q8NF99 534 aaPredicted RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 ING5Q8WYH8 240 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 DDX1Q92499 740 aaKnown RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 BAP1Q92560 729 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 SYN2Q92777 582 aaPredicted RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 SECISBP2LQ93073 1101 aaKnown RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 ZSWIM3Q96MP5 696 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 CDK5RAP1Q96SZ6 601 aaKnown RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
CCS-202ENST00000525435 TTYH3Q9C0H2 523 aa13.04□□□□□ -0.32
CCS-202ENST00000525435 RBSNQ9H1K0 784 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms