RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 ATF7P17544 494 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 STIP1P31948 543 aaKnown RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 CLCN2P51788 898 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 HDAC4P56524 1084 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 RHBDL3P58872 404 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 IRX4P78413 519 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 SNAPC2Q13487 334 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 PSMD6Q15008 389 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 PDCD4Q53EL6 469 aaKnown RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 DACT2Q5SW24 774 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 C12orf60Q5U649 245 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 OGFOD2Q6N063 350 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 AAGABQ6PD74 315 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 USP17L6PQ6QN14 398 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 POTEHQ6S545 545 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 ZCCHC23Q6ZST2 131 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 C14orf80Q86SX3 495 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 MORC4Q8TE76 937 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 PYROXD1Q8WU10 500 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 SERAC1Q96JX3 654 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 DNPEPQ9ULA0 475 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 TMX2-CTNND1H3BSU7 103 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 TM9SF1O15321 606 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 OCM2P0CE71 109 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 OCMP0CE72 109 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 PIM1P11309 404 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 HOXA7P31268 230 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 THOC7Q6I9Y2 204 aaKnown RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 PODNQ7Z5L7 613 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 EPS8L1Q8TE68 723 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 CASP10Q92851 521 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 ZNF512Q96ME7 567 aaPredicted RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 SLC13A1Q9BZW2 595 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 XPNPEP1Q9NQW7 623 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 RABGEF1Q9UJ41 708 aa11.73□□□□□ -0.53
CLNS1A-204ENST00000525428 EMSYQ7Z589 1322 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 F5H6K3 240 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 ATP2A1O14983 1001 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 KLRC2P26717 231 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 CPOXP36551 454 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 BST1Q10588 318 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 CENPUQ71F23 418 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 DEFB107AQ8IZN7 70 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 CCT7Q99832 543 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 PLGRKTQ9HBL7 147 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 POMPQ9Y244 141 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 TISP43B9A030 160 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 ZBTB39O15060 712 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 ITM2AO43736 263 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 CBFA2T3O75081 653 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 SSTR3P32745 418 aaPredicted RBP11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 SLC16A2P36021 539 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 YWHAGP61981 247 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 ATP13A4Q4VNC1 1196 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 PPP6R3Q5H9R7 873 aaPredicted RBP11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 ELMSAN1Q6PJG2 1045 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 CDHR3Q6ZTQ4 885 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 RHPN2Q8IUC4 686 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 MARVELD2Q8N4S9 558 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 TTC13Q8NBP0 860 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 COX4I2Q96KJ9 171 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 APOL6Q9BWW8 343 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 Q9H521 79 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 TRPC7Q9HCX4 862 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 SLC24A2Q9UI40 661 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 TMED5Q9Y3A6 229 aa11.72□□□□□ -0.53
CLNS1A-204ENST00000525428 CLRN2A0PK11 232 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 DENND3A2RUS2 1198 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 DNALI1O14645 258 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 AP1G1O43747 822 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 TGDSO95455 350 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 LDHCP07864 332 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 FAM58BPP0C7Q3 252 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 GLRA2P23416 452 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 CRKP46108 304 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 PRELPP51888 382 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 NR1H2P55055 460 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 PFKPQ01813 784 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 ORC2Q13416 577 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 CHI3L2Q15782 390 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 MSS51Q4VC12 460 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 PRR16Q569H4 304 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 DCAF6Q58WW2 860 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 ADGRG6Q86SQ4 1221 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 RELL1Q8IUW5 271 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 ACSF2Q96CM8 615 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 CEP95Q96GE4 821 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 CCDC106Q9BWC9 280 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 WWP1Q9H0M0 922 aa11.71□□□□□ -0.53
CLNS1A-204ENST00000525428 TDRD3Q9H7E2 651 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms