RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 TNNC1P63316 161 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 MAPRE1Q15691 268 aaKnown RBP13.34□□□□□ -0.27
SMCO4-202ENST00000525141 ZNF77Q15935 545 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 SGSM1Q2NKQ1 1148 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 FSTL4Q6MZW2 842 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 RBM43Q6ZSC3 357 aaKnown RBP13.34□□□□□ -0.27
SMCO4-202ENST00000525141 INTS8Q75QN2 995 aaKnown RBP13.34□□□□□ -0.27
SMCO4-202ENST00000525141 SPEM1Q8N4L4 309 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 CEP295NLQ96MC4 621 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
SMCO4-202ENST00000525141 IL37Q9NZH6 218 aa13.34□□□□□ -0.27
SMCO4-202ENST00000525141 UXTQ9UBK9 157 aaPredicted RBP13.34□□□□□ -0.27
SMCO4-202ENST00000525141 ANTXRLA6NF34 631 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 TRDMT1O14717 391 aaKnown RBP13.33□□□□□ -0.28
SMCO4-202ENST00000525141 HRO43593 1189 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 BEST1O76090 585 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 USP17L7P0C7H9 530 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 PTMSP20962 102 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 CXCL12P48061 93 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 PGFP49763 221 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 VAMP7P51809 220 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
SMCO4-202ENST00000525141 BIRC3Q13489 604 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 ZNF667Q5HYK9 610 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 TMEM196Q5HYL7 178 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 CT47A1Q5JQC4 288 aaPredicted RBP13.33□□□□□ -0.28
SMCO4-202ENST00000525141 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 TTI2Q6NXR4 508 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 DENND5BQ6ZUT9 1274 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 FAM186BQ8IYM0 893 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 CRYBG2Q8N1P7 616 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 B3GALNT2Q8NCR0 500 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 ZMIZ2Q8NF64 920 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 NELFBQ8WX92 580 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 EZH1Q92800 747 aaPredicted RBP13.33□□□□□ -0.28
SMCO4-202ENST00000525141 MSANTD3Q96H12 275 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 TRPC7Q9HCX4 862 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 POLR3BQ9NW08 1133 aaPredicted RBP13.33□□□□□ -0.28
SMCO4-202ENST00000525141 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 CHORDC1Q9UHD1 332 aaPredicted RBP13.33□□□□□ -0.28
SMCO4-202ENST00000525141 PCDHGA2Q9Y5H1 932 aa13.33□□□□□ -0.28
SMCO4-202ENST00000525141 TRAV19A0A0A6YYK7 116 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 SLC16A3O15427 465 aaKnown RBP13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
SMCO4-202ENST00000525141 HLA-DRAP01903 254 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 EPB41P11171 864 aaKnown RBP13.32□□□□□ -0.28
SMCO4-202ENST00000525141 KRT13P13646 458 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 TCF3P15923 654 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 GJA4P35212 333 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ASPAP45381 313 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 TAF10Q12962 218 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 PAK1Q13153 545 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ORC1Q13415 861 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 MTF1Q14872 753 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ZNF699Q32M78 642 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 EML3Q32P44 896 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 KLHL10Q6JEL2 608 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 FILIP1Q7Z7B0 1213 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ACOT1Q86TX2 421 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ADGRG2Q8IZP9 1017 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 FUKQ8N0W3 1084 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 SCAMP5Q8TAC9 235 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 SH3RF2Q8TEC5 729 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 OSCP1Q8WVF1 389 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ATRIPQ8WXE1 791 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 EEF2KMTQ96G04 330 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 TWNKQ96RR1 684 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 SMOQ99835 787 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 DUSP9Q99956 384 aaKnown RBP13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ECT2Q9H8V3 914 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 KIF9Q9HAQ2 790 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMCO4-202ENST00000525141 RWDD2AQ9UIY3 292 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 ARHGAP26Q9UNA1 814 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 WNT6Q9Y6F9 365 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 MYOFQ9NZM1 2061 aa13.32□□□□□ -0.28
SMCO4-202ENST00000525141 TRIM66O15016 1216 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 PAPSS2O95340 614 aaPredicted RBP13.31□□□□□ -0.28
SMCO4-202ENST00000525141 OLFM2O95897 454 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 EGFP01133 1207 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 TRIM49P0CI25 452 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 TRIM49CP0CI26 452 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 TGM1P22735 817 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 GTF2H1P32780 548 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 GCLMP48507 274 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 CCR3P51677 355 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 NDST1P52848 882 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 SLC7A9P82251 487 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 USP4Q13107 963 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 PDGFRLQ15198 375 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 GAB4Q2WGN9 574 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 CCDC183Q5T5S1 534 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 ZC3H14Q6PJT7 736 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms