RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 ATP6V1G3Q96LB4 118 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-216ENST00000524481 CD4P01730 458 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 HSPA9P38646 679 aaKnown RBP12.32□□□□□ -0.44
PTPRK-216ENST00000524481 PIGZQ86VD9 579 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 SCN4BQ8IWT1 228 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 ZBED8Q8IZ13 594 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 SIX6OS1Q8N1H7 587 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 PYROXD2Q8N2H3 581 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 CCNYQ8ND76 341 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 GRK7Q8WTQ7 553 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 MAIP1Q8WWC4 291 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 P3H4Q92791 437 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 SNF8Q96H20 258 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 CDC42EP4Q9H3Q1 356 aaKnown RBP12.32□□□□□ -0.44
PTPRK-216ENST00000524481 PCYOX1Q9UHG3 505 aa12.32□□□□□ -0.44
PTPRK-216ENST00000524481 ARID2Q68CP9 1835 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 MYBPHLA2RUH7 354 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 KRT7P08729 469 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 PECAM1P16284 738 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-216ENST00000524481 DESP17661 470 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 KDELR1P24390 212 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 GDF10P55107 478 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 PITX1P78337 314 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-216ENST00000524481 MTMR3Q13615 1198 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 CLUL1Q15846 466 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 CA9Q16790 459 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 KATNAL2Q8IYT4 538 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 SH3TC2Q8TF17 1288 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 RBM15Q96T37 977 aaKnown RBP eCLIP12.31□□□□□ -0.441e-15■□□□□ 9.9
PTPRK-216ENST00000524481 UBXN6Q9BZV1 441 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 GTF2IRD1Q9UHL9 959 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 MBLAC1A4D2B0 266 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-216ENST00000524481 RASGRF2O14827 1237 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 SEPT4O43236 478 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 OR4Q2P0C623 313 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 PBX3P40426 434 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 AARSP49588 968 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTPRK-216ENST00000524481 CDC42EP1Q00587 391 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 ITGA7Q13683 1181 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 UBXN11Q5T124 520 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 FAM117BQ6P1L5 589 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 TAF2Q6P1X5 1199 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 UBR7Q8N806 425 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 GLT1D1Q96MS3 346 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 PGLYRP2Q96PD5 576 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 SIK2Q9H0K1 926 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 LRRC19Q9H756 370 aa12.31□□□□□ -0.44
PTPRK-216ENST00000524481 ARL5CA6NH57 179 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 PTGESO14684 152 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 IRAK1P51617 712 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 ZNF268Q14587 947 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 FASTKD3Q14CZ7 662 aaKnown RBP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 KYAT1Q16773 422 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 SDHAF4Q5VUM1 108 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 TRNP1Q6NT89 227 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 OSTM1Q86WC4 334 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 UNC45BQ8IWX7 931 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 CXorf38Q8TB03 319 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 ZNF560Q96MR9 790 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 PEBP4Q96S96 227 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 ZDHHC18Q9NUE0 388 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 NEU2Q9Y3R4 380 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 VGLL3A8MV65 326 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 FAM155AB1AL88 458 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 TKTP29401 623 aaKnown RBP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 FNTAP49354 379 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 PDIA2Q13087 525 aaKnown RBP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 CCNG2Q16589 344 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 LCLAT1Q6UWP7 414 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 HACE1Q8IYU2 909 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 GPR152Q8TDT2 470 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 KRT82Q9NSB4 513 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 TRPV2Q9Y5S1 764 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 TLL2Q9Y6L7 1015 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 PRRC2BQ5JSZ5 2229 aaKnown RBP12.3□□□□□ -0.44
PTPRK-216ENST00000524481 hCG_1818297A0A087WSY0 165 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 MCF2LO15068 1137 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 KCNN4O15554 427 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 AP1G2O75843 785 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 USP17L7P0C7H9 530 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 CDKN2BP42772 138 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 OR1G1P47890 313 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 SV2CQ496J9 727 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 CCDC13Q8IYE1 715 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 DEFB106AQ8N104 65 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 TNIP3Q96KP6 325 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 B3GALT6Q96L58 329 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 LHX5Q9H2C1 402 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 PLEKHA5Q9HAU0 1116 aa12.3□□□□□ -0.44
PTPRK-216ENST00000524481 WDR35Q9P2L0 1181 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms