RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 FBF1Q8TES7 1133 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 PAFAH2Q99487 392 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 CALN1Q9BXU9 219 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 XPO7Q9UIA9 1087 aaKnown RBP11.83□□□□□ -0.52
TNPO1-213ENST00000523768 C2CD2Q9Y426 696 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 USH1CQ9Y6N9 552 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 MCM3APO60318 1980 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 IGF2BP3O00425 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
TNPO1-213ENST00000523768 ALADP13716 330 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 ARF4P18085 180 aaPredicted RBP11.83□□□□□ -0.52
TNPO1-213ENST00000523768 KRT4P19013 534 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 OSBPP22059 807 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 PPIL2Q13356 520 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 LAMC2Q13753 1193 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 TFDP2Q14188 446 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 TMEM132DQ14C87 1099 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 FAM47CQ5HY64 1035 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 WDR78Q5VTH9 848 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 PNMA8AQ86V59 439 aaPredicted RBP11.83□□□□□ -0.52
TNPO1-213ENST00000523768 NT5DC4Q86YG4 428 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 PALM2Q8IXS6 379 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 UBA3Q8TBC4 463 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 ALKBH8Q96BT7 664 aaKnown RBP11.83□□□□□ -0.52
TNPO1-213ENST00000523768 BAIAP2L1Q9UHR4 511 aa11.83□□□□□ -0.52
TNPO1-213ENST00000523768 CSDE1O75534 798 aaKnown RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 UNC5CO95185 931 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 LGALS2P05162 132 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 ATP2A2P16615 1042 aaKnown RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 CYP3A5P20815 502 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 NDST1P52848 882 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 CDH6P55285 790 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 IGBP1P78318 339 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 RBP5P82980 135 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 ROR1Q01973 937 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 EFTUD2Q15029 972 aaKnown RBP eCLIP11.82□□□□□ -0.523e-7■■■■■ 28.2
TNPO1-213ENST00000523768 STILQ15468 1287 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 TRNP1Q6NT89 227 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 SHCBP1Q8NEM2 672 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 NLGN2Q8NFZ4 835 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 DCAKDQ8WVC6 231 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 RXFP2Q8WXD0 754 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 MRRFQ96E11 262 aaKnown RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 CPB2Q96IY4 423 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 SLCO1B3Q9NPD5 702 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 COL1A2P08123 1366 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 TM9SF1O15321 606 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 DDNO94850 711 aaPredicted RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 PDGFRAP16234 1089 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 MSH2P43246 934 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 BASP1P80723 227 aaKnown RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 BBS9Q3SYG4 887 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 DARS2Q6PI48 645 aaKnown RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 LVRNQ6Q4G3 990 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 FASTKD5Q7L8L6 764 aaKnown RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 ZNF75CPQ92670 426 aaPredicted RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 RNF157Q96PX1 679 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 TACO1Q9BSH4 297 aaKnown RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 GBA2Q9HCG7 927 aaPredicted RBP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.82□□□□□ -0.52
TNPO1-213ENST00000523768 TSPAN16Q9UKR8 245 aa11.82□□□□□ -0.52
TNPO1-213ENST00000523768 DPYSL4O14531 572 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 ATP5HO75947 161 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 PFKMP08237 780 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 GBP2P32456 591 aaPredicted RBP11.81□□□□□ -0.52
TNPO1-213ENST00000523768 KCNJ11Q14654 390 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 SETDB1Q15047 1291 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 PDK2Q15119 407 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 SH3PXD2AQ5TCZ1 1133 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 OR6B2Q6IFH4 312 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 FAM183BPQ6ZVS7 135 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 BANPQ8N9N5 519 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 USP6NLQ92738 828 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 CYTH2Q99418 400 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 NT5C1AQ9BXI3 368 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 TXLNGQ9NUQ3 528 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 DPP3Q9NY33 737 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 E5RJQ4 531 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 CHADO15335 359 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 PRPSAP2O60256 369 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 SPAG6O75602 509 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 DCTN3O75935 186 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 KRT16P08779 473 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 BOLA3Q53S33 107 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 SPDYAQ5MJ70 313 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 TAPT1Q6NXT6 567 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 NPNTQ6UXI9 565 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 ARMCX2Q7L311 632 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 VSIG1Q86XK7 387 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 MAP7D3Q8IWC1 876 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 ZNF276Q8N554 614 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 AFG1LQ8WV93 481 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 C10orf82Q8WW14 230 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 TEKT4Q8WW24 435 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 RTP4Q96DX8 246 aa11.81□□□□□ -0.52
TNPO1-213ENST00000523768 ACAP3Q96P50 834 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms