RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	GFRA1	P56159	465 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	GNAI1	P63096	354 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	TEK	Q02763	1124 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	EGR3	Q06889	387 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	MAP4K2	Q12851	820 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	IKZF1	Q13422	519 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	PDE1C	Q14123	709 aa	Predicted RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	LY6K	Q17RY6	165 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	EEF1DP3	Q658K8	133 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	CCNI2	Q6ZMN8	369 aa	Predicted RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	TOGARAM2	Q6ZUX3	1019 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	LCA5	Q86VQ0	697 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	TTC30A	Q86WT1	665 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	ANKRD13B	Q86YJ7	626 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	MIGA1	Q8NAN2	632 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	PIP4K2C	Q8TBX8	421 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	BTN2A2	Q8WVV5	523 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	FCRL3	Q96P31	734 aa	Predicted RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	ELAC2	Q9BQ52	826 aa	Known RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	FOXP3	Q9BZS1	431 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	BCAS3	Q9H6U6	928 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	AGO3	Q9H9G7	860 aa	Known RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	PA2G4	Q9UQ80	394 aa	Known RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	BACE2	Q9Y5Z0	518 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	APC	P25054	2843 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	KNTC1	P50748	2209 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	RAD50	Q92878	1312 aa		5.71	□□□□□ -1.5
PABPC1-223	ENST00000523636	ADAMTS9	Q9P2N4	1935 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZMYM2	Q9UBW7	1377 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	E2F8	A0AVK6	867 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636		B8ZZF3	427 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	APAF1	O14727	1248 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZBED4	O75132	1171 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	CIAO1	O76071	339 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	PABPC1	P11940	636 aa	Known RBP	5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	SSTR4	P31391	388 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	MPL	P40238	635 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	ADAM17	P78536	824 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	CALD1	Q05682	793 aa	Known RBP	5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	SLFN5	Q08AF3	891 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	STK3	Q13188	491 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	MTMR1	Q13613	665 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	TESK1	Q15569	626 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	TWISTNB	Q3B726	338 aa	Predicted RBP	5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	RTP2	Q5QGT7	225 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZBTB41	Q5SVQ8	909 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	KIAA1614	Q5VZ46	1190 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	PARM1	Q6UWI2	310 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	NSMF	Q6X4W1	530 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	LRRC55	Q6ZSA7	311 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	PIP4P1	Q86T03	277 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	KBTBD6	Q86V97	674 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	WFDC3	Q8IUB2	231 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	THNSL1	Q8IYQ7	743 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	AFAP1L2	Q8N4X5	818 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	NKAIN3	Q8N8D7	197 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	PI4K2B	Q8TCG2	481 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	AUTS2	Q8WXX7	1259 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	KCTD13	Q8WZ19	329 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	MTMR8	Q96EF0	704 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	CCDC120	Q96HB5	630 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	DHRS4	Q9BTZ2	278 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	LGR4	Q9BXB1	951 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	XPO4	Q9C0E2	1151 aa	Known RBP	5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	DKK4	Q9UBT3	224 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZNF180	Q9UJW8	692 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	DOCK5	Q9H7D0	1870 aa		5.7	□□□□□ -1.5
PABPC1-223	ENST00000523636	FBN1	P35555	2871 aa	Known RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	TRBV23OR9-2	A0A075B6M9	112 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	TRBV23-1	A0A0A0MS06	115 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	TMEM82	A0PJX8	343 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	SNRPB2	P08579	225 aa	Known RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	CD8B	P10966	210 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	LAMP2	P13473	410 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	KCNA2	P16389	499 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	GRIA2	P42262	883 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZNF131	P52739	623 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	SNAP25	P60880	206 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	SUMO1	P63165	101 aa	Known RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	SIM1	P81133	766 aa	Predicted RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	KLRC3	Q07444	240 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	BNIP3	Q12983	259 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	BAAT	Q14032	418 aa	Predicted RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	DPY19L1	Q2PZI1	675 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	DNAJC21	Q5F1R6	531 aa	Known RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	WWC2	Q6AWC2	1192 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	IQCE	Q6IPM2	695 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	MZT2B	Q6NZ67	158 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	CYP2R1	Q6VVX0	501 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	TPRG1	Q6ZUI0	275 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	CHST3	Q7LGC8	479 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZBTB46	Q86UZ6	589 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	SCFD2	Q8WU76	684 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	NINJ1	Q92982	152 aa		5.69	□□□□□ -1.5

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