RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 PTPN1P18031 435 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 RPL13P26373 211 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 PMLP29590 882 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 CASP14P31944 242 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 VIPR1P32241 457 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 COPB2P35606 906 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 PBX1P40424 430 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 IRAK1P51617 712 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 KPNA1P52294 538 aaPredicted RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 PSMC5P62195 406 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 OCRLQ01968 901 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 ITGB3BPQ13352 177 aaPredicted RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 ADAM9Q13443 819 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 SNAPC2Q13487 334 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 STXBP2Q15833 593 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 KNOP1Q1ED39 458 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 VWA3BQ502W6 1294 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 RNF219Q5W0B1 726 aaPredicted RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 FOXR2Q6PJQ5 311 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 EP400NLQ6ZTU2 488 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 C1orf186Q6ZWK4 172 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 PRRT2Q7Z6L0 340 aaPredicted RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 EFHBQ8N7U6 833 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 TC2NQ8N9U0 490 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 ZNF397Q8NF99 534 aaPredicted RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 RDM1Q8NG50 284 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 SCFD1Q8WVM8 642 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 OPTNQ96CV9 577 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 LIN37Q96GY3 246 aaPredicted RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 C16orf45Q96MC5 204 aaPredicted RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 NUP58Q9BVL2 599 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 NAA15Q9BXJ9 866 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 PARVGQ9HBI0 331 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 EMC7Q9NPA0 242 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 A1CFQ9NQ94 594 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 TYW1Q9NV66 732 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 ZNHIT6Q9NWK9 470 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 SEL1LQ9UBV2 794 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 AGTPBP1Q9UPW5 1226 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 LUC7L2Q9Y383 392 aaKnown RBP7.07□□□□□ -1.28
LINC00534-203ENST00000523406 PCDHA10Q9Y5I2 948 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 SPO11Q9Y5K1 396 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 SBF1O95248 1867 aa7.07□□□□□ -1.28
LINC00534-203ENST00000523406 POLR2AP24928 1970 aaKnown RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 GOLGA6L9A6NEM1 432 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 RSPH10B2B2RC85 870 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 ACOT7O00154 380 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 TGM5O43548 720 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 ATP9AO75110 1047 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 MFAP3LO75121 409 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 HIP1RO75146 1068 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 EIF3JO75822 258 aaKnown RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 PRPF6O94906 941 aaKnown RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 C4BPAP04003 597 aaKnown RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 TUBB4AP04350 444 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 RSPH10BP0C881 870 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 MYBP10242 640 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 KRT9P35527 623 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 HERVK_113P62684 666 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 SYCP1Q15431 976 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 MAN2A1Q16706 1144 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 EDRF1Q3B7T1 1238 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 ODR4Q5SWX8 454 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 WDR78Q5VTH9 848 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 BTBD8Q5XKL5 378 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 OLFML2BQ68BL8 750 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 CC2D1AQ6P1N0 951 aaPredicted RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 B3GNT9Q6UX72 402 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 OTUD6AQ7L8S5 288 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 TMTC1Q8IUR5 882 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 FAM126BQ8IXS8 530 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 SMAP1Q8IYB5 467 aaPredicted RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 KIAA1958Q8N8K9 716 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 DNERQ8NFT8 737 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 OR8K1Q8NGG5 319 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 ATP6V0A1Q93050 837 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 IQCDQ96DY2 449 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 MOV10L1Q9BXT6 1211 aaKnown RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 SPATC1LQ9H0A9 340 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 NDST4Q9H3R1 872 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 BCAS3Q9H6U6 928 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 POLD4Q9HCU8 107 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 KCND1Q9NSA2 647 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 DDX56Q9NY93 547 aaKnown RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 HSPBP1Q9NZL4 362 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 BTBD7Q9P203 1132 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 ODF2LQ9ULJ1 636 aa7.06□□□□□ -1.28
LINC00534-203ENST00000523406 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.06□□□□□ -1.28
LINC00534-203ENST00000523406 USP27XA6NNY8 438 aa7.05□□□□□ -1.28
LINC00534-203ENST00000523406 ALG1L2C9J202 215 aa7.05□□□□□ -1.28
LINC00534-203ENST00000523406 PDXKO00764 312 aa7.05□□□□□ -1.28
LINC00534-203ENST00000523406 USO1O60763 962 aaKnown RBP7.05□□□□□ -1.28
LINC00534-203ENST00000523406 LYPLA2O95372 231 aa7.05□□□□□ -1.28
LINC00534-203ENST00000523406 CCNE2O96020 404 aa7.05□□□□□ -1.28
LINC00534-203ENST00000523406 GYPCP04921 128 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms