RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 WARSP23381 471 aaKnown RBP24.27■■□□□ 1.48
PVT1-218ENST00000523328 EIF2DP41214 584 aaKnown RBP24.27■■□□□ 1.48
PVT1-218ENST00000523328 NOP14P78316 857 aaKnown RBP24.27■■□□□ 1.48
PVT1-218ENST00000523328 TRIM61Q5EBN2 209 aa24.27■■□□□ 1.48
PVT1-218ENST00000523328 C12orf40Q86WS4 652 aa24.27■■□□□ 1.48
PVT1-218ENST00000523328 FRMD1Q8N878 549 aa24.27■■□□□ 1.48
PVT1-218ENST00000523328 DEFB124Q8NES8 71 aa24.27■■□□□ 1.48
PVT1-218ENST00000523328 PNKPQ96T60 521 aa24.27■■□□□ 1.48
PVT1-218ENST00000523328 TMEM74BQ9NUR3 256 aa24.27■■□□□ 1.48
PVT1-218ENST00000523328 ADAMTS9Q9P2N4 1935 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 A0A0A0MRY4 1105 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 TMEM8BA6NDV4 472 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 TNFRSF10BO14763 440 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 SCAMP3O14828 347 aaKnown RBP24.26■■□□□ 1.47
PVT1-218ENST00000523328 PRPF6O94906 941 aaKnown RBP24.26■■□□□ 1.47
PVT1-218ENST00000523328 KAT7O95251 611 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 OAS1P00973 400 aaKnown RBP24.26■■□□□ 1.47
PVT1-218ENST00000523328 PDGFRBP09619 1106 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 IDEP14735 1019 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 ANXA13P27216 316 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 TIE1P35590 1138 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 PTGER3P43115 390 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 KIR2DL1P43626 348 aaPredicted RBP24.26■■□□□ 1.47
PVT1-218ENST00000523328 PPP3CCP48454 512 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 CYP27A1Q02318 531 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 LMAN2Q12907 356 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 HSF5Q4G112 596 aaPredicted RBP24.26■■□□□ 1.47
PVT1-218ENST00000523328 EMC10Q5UCC4 262 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 RHBDF2Q6PJF5 856 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 LPCAT2Q7L5N7 544 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 MYCBPAPQ8TBZ2 947 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 WHAMMQ8TF30 809 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 SMPD4Q9NXE4 827 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 MBD1Q9UIS9 605 aaPredicted RBP24.26■■□□□ 1.47
PVT1-218ENST00000523328 NME7Q9Y5B8 376 aa24.26■■□□□ 1.47
PVT1-218ENST00000523328 PKD1L2Q7Z442 2459 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 F8VP50 259 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 SLC9A3R1O14745 358 aaPredicted RBP24.25■■□□□ 1.47
PVT1-218ENST00000523328 TRIM66O15016 1216 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 ARMCX6Q7L4S7 300 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 SYT12Q8IV01 421 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 TMEFF1Q8IYR6 380 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 C8orf48Q96LL4 319 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 CLIC6Q96NY7 704 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 TMEM30AQ9NV96 361 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 EHD2Q9NZN4 543 aa24.25■■□□□ 1.47
PVT1-218ENST00000523328 R3HCC1Q9Y3T6 440 aaKnown RBP24.25■■□□□ 1.47
PVT1-218ENST00000523328 SRPRBQ9Y5M8 271 aaKnown RBP24.25■■□□□ 1.47
PVT1-218ENST00000523328 KIAA0391O15091 583 aaKnown RBP24.24■■□□□ 1.47
PVT1-218ENST00000523328 ADAM23O75077 832 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 APODP05090 189 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 RESTQ13127 1097 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 MAP7D1Q3KQU3 841 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 CBWD2Q8IUF1 395 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 SPACA7Q96KW9 195 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 NUSAP1Q9BXS6 441 aaKnown RBP24.24■■□□□ 1.47
PVT1-218ENST00000523328 POLMQ9NP87 494 aaPredicted RBP24.24■■□□□ 1.47
PVT1-218ENST00000523328 ZDHHC4Q9NPG8 344 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 PANK4Q9NVE7 773 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 CFAP97Q9P2B7 532 aa24.24■■□□□ 1.47
PVT1-218ENST00000523328 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.24■■□□□ 1.47
PVT1-218ENST00000523328 TNNC2P02585 160 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 ENGP17813 658 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 CACNA2D1P54289 1103 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 TAF10Q12962 218 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 DUOXA2Q1HG44 320 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 MDH1BQ5I0G3 518 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 EOGTQ5NDL2 527 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 SLC23A3Q6PIS1 610 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 PHTF2Q8N3S3 785 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 MMS19Q96T76 1030 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 MRPL45Q9BRJ2 306 aaKnown RBP24.23■■□□□ 1.47
PVT1-218ENST00000523328 ARHGEF4Q9NR80 690 aa24.23■■□□□ 1.47
PVT1-218ENST00000523328 CIZ1Q9ULV3 898 aaPredicted RBP24.23■■□□□ 1.47
PVT1-218ENST00000523328 A0A087X0B3 334 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 ZNF233A6NK53 670 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 MAP3K13O43283 966 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 ADH1CP00326 375 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 ABL1P00519 1130 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 ADH5P11766 374 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 TXLNAP40222 546 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 GRIA2P42262 883 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 MAPK8P45983 427 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 SURF1Q15526 300 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 SPDYCQ5MJ68 293 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 PEAR1Q5VY43 1037 aaPredicted RBP24.22■■□□□ 1.47
PVT1-218ENST00000523328 HMGB4Q8WW32 186 aa24.22■■□□□ 1.47
PVT1-218ENST00000523328 BCCIPQ9P287 314 aaKnown RBP eCLIP24.22■■□□□ 1.47
PVT1-218ENST00000523328 ATXN2Q99700 1313 aaKnown RBP24.21■■□□□ 1.47
PVT1-218ENST00000523328 DMXL2Q8TDJ6 3036 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 SRRM3A6NNA2 597 aaPredicted RBP24.21■■□□□ 1.47
PVT1-218ENST00000523328 HOXB3P14651 431 aaPredicted RBP24.21■■□□□ 1.47
PVT1-218ENST00000523328 GNL1P36915 607 aaPredicted RBP24.21■■□□□ 1.47
PVT1-218ENST00000523328 TNFRSF4P43489 277 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 KDSRQ06136 332 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 TDRD10Q5VZ19 366 aaKnown RBP24.21■■□□□ 1.47
PVT1-218ENST00000523328 LYSMD4Q5XG99 296 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 KIAA1211LQ6NV74 962 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 HS2ST1Q7LGA3 356 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms