RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 C11orf57Q6ZUT1 292 aaPredicted RBP23.2■■□□□ 1.3
HOXA3-205ENST00000522456 DENND5BQ6ZUT9 1274 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 DNASE1L2Q92874 299 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 E2F7Q96AV8 911 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 RMDN1Q96DB5 314 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 MYRFLQ96LU7 910 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 NELL2Q99435 816 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 INTS2Q9H0H0 1204 aaKnown RBP23.2■■□□□ 1.3
HOXA3-205ENST00000522456 HEBP1Q9NRV9 189 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 KRT82Q9NSB4 513 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 TMEM30AQ9NV96 361 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 EHD2Q9NZN4 543 aa23.2■■□□□ 1.3
HOXA3-205ENST00000522456 KCNJ18B7U540 433 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 PRKCSHP14314 528 aaPredicted RBP23.19■■□□□ 1.3
HOXA3-205ENST00000522456 FCARP24071 287 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 RAD23BP54727 409 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 CSTF1Q05048 431 aaKnown RBP23.19■■□□□ 1.3
HOXA3-205ENST00000522456 TYRO3Q06418 890 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 KCNJ12Q14500 433 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 MAN2A1Q16706 1144 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 KLHL40Q2TBA0 621 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 ZNF852Q6ZMS4 543 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 RRAGAQ7L523 313 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 SUMF1Q8NBK3 374 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 CLDN23Q96B33 292 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 HNRNPABQ99729 332 aaKnown RBP23.19■■□□□ 1.3
HOXA3-205ENST00000522456 TUBGCP2Q9BSJ2 902 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 CRACR2AQ9BSW2 395 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 DMAP1Q9NPF5 467 aaPredicted RBP23.19■■□□□ 1.3
HOXA3-205ENST00000522456 GCNT4Q9P109 453 aa23.19■■□□□ 1.3
HOXA3-205ENST00000522456 MRPS17Q9Y2R5 130 aaKnown RBP23.19■■□□□ 1.3
HOXA3-205ENST00000522456 DNAH14Q0VDD8 3507 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 NCAM2O15394 837 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 GRM2Q14416 872 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 GBP6Q6ZN66 633 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 TMEM150AQ86TG1 271 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 GPIHBP1Q8IV16 184 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 ARHGEF19Q8IW93 802 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 DCLK2Q8N568 766 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 SLC4A11Q8NBS3 891 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 DEPDC1BQ8WUY9 529 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 MRPS31Q92665 395 aaKnown RBP23.18■■□□□ 1.3
HOXA3-205ENST00000522456 TASP1Q9H6P5 420 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 PCDHGA2Q9Y5H1 932 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 PTPRDP23468 1912 aa23.18■■□□□ 1.3
HOXA3-205ENST00000522456 OTOGLQ3ZCN5 2332 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 FAM200BP0CF97 657 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 EEF1GP26641 437 aaKnown RBP23.17■■□□□ 1.3
HOXA3-205ENST00000522456 VIPR2P41587 438 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 RPS9P46781 194 aaKnown RBP23.17■■□□□ 1.3
HOXA3-205ENST00000522456 MAP3K7CLP57077 242 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 USP46P62068 366 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 IFRD2Q12894 506 aaPredicted RBP23.17■■□□□ 1.3
HOXA3-205ENST00000522456 VWA3BQ502W6 1294 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 TCP11X2Q5H9J9 407 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 PPP1R26Q5T8A7 1209 aaPredicted RBP23.17■■□□□ 1.3
HOXA3-205ENST00000522456 NUP93Q8N1F7 819 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 SMOQ99835 787 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 NDST4Q9H3R1 872 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 PCDHB4Q9Y5E5 795 aa23.17■■□□□ 1.3
HOXA3-205ENST00000522456 CACNA1AO00555 2505 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 PES1O00541 588 aaKnown RBP23.16■■□□□ 1.3
HOXA3-205ENST00000522456 BEST1O76090 585 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 LETM1O95202 739 aaPredicted RBP23.16■■□□□ 1.3
HOXA3-205ENST00000522456 PSMC3P17980 439 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 SLC9A1P19634 815 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 GCNT1Q02742 428 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 ARID3BQ8IVW6 561 aaPredicted RBP23.16■■□□□ 1.3
HOXA3-205ENST00000522456 MAB21L3Q8N8X9 362 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 ATRIPQ8WXE1 791 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 KAT5Q92993 513 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 TRMT61BQ9BVS5 477 aaKnown RBP23.16■■□□□ 1.3
HOXA3-205ENST00000522456 SLC46A2Q9BY10 475 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 NAT10Q9H0A0 1025 aaKnown RBP23.16■■□□□ 1.3
HOXA3-205ENST00000522456 BRD9Q9H8M2 597 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 CSNK1G1Q9HCP0 422 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 UBE2TQ9NPD8 197 aaPredicted RBP23.16■■□□□ 1.3
HOXA3-205ENST00000522456 FANCLQ9NW38 375 aa23.16■■□□□ 1.3
HOXA3-205ENST00000522456 RTN3O95197 1032 aaPredicted RBP23.15■■□□□ 1.3
HOXA3-205ENST00000522456 DDX6P26196 483 aaKnown RBP eCLIP23.15■■□□□ 1.3
HOXA3-205ENST00000522456 WEE1P30291 646 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 MYL5Q02045 173 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 EXOC3L4Q17RC7 722 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 TXNDC8Q6A555 127 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 TRIM65Q6PJ69 517 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 TMEM270Q6UE05 265 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 UBR7Q8N806 425 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 IRF7Q92985 503 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 TTLL2Q9BWV7 592 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 ZSCAN32Q9NX65 697 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 TRPM5Q9NZQ8 1165 aa23.15■■□□□ 1.3
HOXA3-205ENST00000522456 NUP210Q8TEM1 1887 aaPredicted RBP23.14■■□□□ 1.29
HOXA3-205ENST00000522456 GTPBP10A4D1E9 387 aaKnown RBP23.14■■□□□ 1.29
HOXA3-205ENST00000522456 SHISA7A6NL88 538 aa23.14■■□□□ 1.29
HOXA3-205ENST00000522456 SOBPA7XYQ1 873 aa23.14■■□□□ 1.29
HOXA3-205ENST00000522456 DPYSL4O14531 572 aa23.14■■□□□ 1.29
HOXA3-205ENST00000522456 CD19P15391 556 aa23.14■■□□□ 1.29
HOXA3-205ENST00000522456 ACO1P21399 889 aaKnown RBP23.14■■□□□ 1.29
HOXA3-205ENST00000522456 YWHAQP27348 245 aa23.14■■□□□ 1.29
HOXA3-205ENST00000522456 AVPR1AP37288 418 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms