RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 LEFTY2O00292 366 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 SCAMP3O14828 347 aaKnown RBP21.99■■□□□ 1.11
SDCBP-209ENST00000522243 IKBKBO14920 756 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 P4HA1P13674 534 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 CCDC130P13994 396 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 YWHAQP27348 245 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 GCLMP48507 274 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 PDE6CP51160 858 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 NDST1P52848 882 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 PRR23BQ6ZRT6 265 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 FAM186BQ8IYM0 893 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 SMYD4Q8IYR2 804 aaPredicted RBP21.99■■□□□ 1.11
SDCBP-209ENST00000522243 GUF1Q8N442 669 aaKnown RBP21.99■■□□□ 1.11
SDCBP-209ENST00000522243 ATP2A3Q93084 1043 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 P2RY13Q9BPV8 354 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 ATP8B3O60423 1300 aa21.99■■□□□ 1.11
SDCBP-209ENST00000522243 MAPK13O15264 365 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 PAPSS2O95340 614 aaPredicted RBP21.98■■□□□ 1.11
SDCBP-209ENST00000522243 ASS1P00966 412 aaKnown RBP21.98■■□□□ 1.11
SDCBP-209ENST00000522243 KRT13P13646 458 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 TCF3P15923 654 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 PPP3CCP48454 512 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 PPP3CAQ08209 521 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 ADAM9Q13443 819 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 PNOCQ13519 176 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 NFIL3Q16649 462 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 FUKQ8N0W3 1084 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 SCAMP5Q8TAC9 235 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 TAF4BQ92750 862 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 FBXO32Q969P5 355 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 KRT82Q9NSB4 513 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 POLR3BQ9NW08 1133 aaPredicted RBP21.98■■□□□ 1.11
SDCBP-209ENST00000522243 CHORDC1Q9UHD1 332 aaPredicted RBP21.98■■□□□ 1.11
SDCBP-209ENST00000522243 CPQQ9Y646 472 aa21.98■■□□□ 1.11
SDCBP-209ENST00000522243 HRO43593 1189 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 RNF40O75150 1001 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 AP1G2O75843 785 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 OAS1P00973 400 aaKnown RBP21.97■■□□□ 1.11
SDCBP-209ENST00000522243 MBL2P11226 248 aaPredicted RBP21.97■■□□□ 1.11
SDCBP-209ENST00000522243 PFKLP17858 780 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 RPL13P26373 211 aaKnown RBP21.97■■□□□ 1.11
SDCBP-209ENST00000522243 ASPAP45381 313 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 SLC7A9P82251 487 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 BECN1Q14457 450 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 INTS8Q75QN2 995 aaKnown RBP21.97■■□□□ 1.11
SDCBP-209ENST00000522243 LONP2Q86WA8 852 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 TAS1R2Q8TE23 839 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 CD101Q93033 1021 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 SECISBP2LQ93073 1101 aaKnown RBP21.97■■□□□ 1.11
SDCBP-209ENST00000522243 RMDN1Q96DB5 314 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 EEF2KMTQ96G04 330 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 SMARCD1Q96GM5 515 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 DMAP1Q9NPF5 467 aaPredicted RBP21.97■■□□□ 1.11
SDCBP-209ENST00000522243 FAM49BQ9NUQ9 324 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 RAB23Q9ULC3 237 aa21.97■■□□□ 1.11
SDCBP-209ENST00000522243 MYO16Q9Y6X6 1858 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 BEST1O76090 585 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 RTN3O95197 1032 aaPredicted RBP21.96■■□□□ 1.11
SDCBP-209ENST00000522243 OLFM2O95897 454 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 DRD1P21728 446 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 PSMC2P35998 433 aaKnown RBP21.96■■□□□ 1.11
SDCBP-209ENST00000522243 PXNP49023 591 aaPredicted RBP21.96■■□□□ 1.11
SDCBP-209ENST00000522243 SLC5A3P53794 718 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 NR1H3Q13133 447 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 SIM2Q14190 667 aaPredicted RBP21.96■■□□□ 1.11
SDCBP-209ENST00000522243 C12orf29Q8N999 325 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 ZMIZ2Q8NF64 920 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 SLC2A14Q8TDB8 520 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 EZH1Q92800 747 aaPredicted RBP21.96■■□□□ 1.11
SDCBP-209ENST00000522243 TWNKQ96RR1 684 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 SMOQ99835 787 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 APOBEC3GQ9HC16 384 aaKnown RBP21.96■■□□□ 1.11
SDCBP-209ENST00000522243 GMEB2Q9UKD1 530 aa21.96■■□□□ 1.11
SDCBP-209ENST00000522243 TNFRSF10BO14763 440 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 NFATC1O95644 943 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 ADORA2BP29275 332 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 ZCWPW2Q504Y3 356 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 FILIP1Q7Z7B0 1213 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 UNC93AQ86WB7 457 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 CRYBG2Q8N1P7 616 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 CCDC34Q96HJ3 373 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 IMPG2Q9BZV3 1241 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 CFAP97Q9P2B7 532 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 CFAP54Q96N23 3096 aa21.95■■□□□ 1.1
SDCBP-209ENST00000522243 OTOGLQ3ZCN5 2332 aa21.94■■□□□ 1.1
SDCBP-209ENST00000522243 GOLGA6L4A6NEF3 574 aa21.94■■□□□ 1.1
SDCBP-209ENST00000522243 MAP3K7CLP57077 242 aa21.94■■□□□ 1.1
SDCBP-209ENST00000522243 FMR1NBQ8N0W7 255 aaPredicted RBP21.94■■□□□ 1.1
SDCBP-209ENST00000522243 PDZD8Q8NEN9 1154 aa21.94■■□□□ 1.1
SDCBP-209ENST00000522243 ERCC4Q92889 916 aaPredicted RBP21.94■■□□□ 1.1
SDCBP-209ENST00000522243 EXOC4Q96A65 974 aa21.94■■□□□ 1.1
SDCBP-209ENST00000522243 GMIPQ9P107 970 aa21.94■■□□□ 1.1
SDCBP-209ENST00000522243 SLC8A2Q9UPR5 921 aa21.94■■□□□ 1.1
SDCBP-209ENST00000522243 COCHO43405 550 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 ATG13O75143 517 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 CD58P19256 250 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 EP300Q09472 2414 aaPredicted RBP21.93■■□□□ 1.1
SDCBP-209ENST00000522243 KIAA1549LQ6ZVL6 1849 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 WDR5BQ86VZ2 330 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 RPLP0P6Q8NHW5 317 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms