RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 HEBP1Q9NRV9 189 aa11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 TDP1Q9NUW8 608 aa11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 THG1LQ9NWX6 298 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 COMMD8Q9NX08 183 aa11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 RAB20Q9NX57 234 aa11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 TRPM5Q9NZQ8 1165 aa11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 ARMCX3Q9UH62 379 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 COQ4Q9Y3A0 265 aa11.06□□□□□ -0.64
TRAPPC9-209ENST00000521167 ATG2BQ96BY7 2078 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 TRAV19A0A0A6YYK7 116 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 TRIM49BA6NDI0 452 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 FAM170BA6NMN3 283 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 ARNTLO00327 626 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 RTN3O95197 1032 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 USP17L7P0C7H9 530 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 BMP6P22004 513 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 PTPRZ1P23471 2315 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 NDST1P52848 882 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 CLEC17AQ6ZS10 378 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 TPRG1Q6ZUI0 275 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 PAQR9Q6ZVX9 377 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 ACOT1Q86TX2 421 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 NUP93Q8N1F7 819 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 STKLD1Q8NE28 680 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 USP13Q92995 863 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 ELMO3Q96BJ8 720 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 SMARCD1Q96GM5 515 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 LRRC3BQ96PB8 259 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 DUSP9Q99956 384 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 MED10Q9BTT4 135 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 NT5C1AQ9BXI3 368 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 FOXQ1Q9C009 403 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 MMRN2Q9H8L6 949 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 APOBEC3GQ9HC16 384 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 LTB4R2Q9NPC1 389 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 DLGAP2Q9P1A6 1054 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 MYOFQ9NZM1 2061 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 NCANO14594 1321 aa11.05□□□□□ -0.64
TRAPPC9-209ENST00000521167 CLDN5O00501 218 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 PMM2O15305 246 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 TADA3O75528 432 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 PRAMEF12O95522 483 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 TCF3P15923 654 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 HDCP19113 662 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 USP46P62068 366 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 UBXN2BQ14CS0 331 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 TCERG1LQ5VWI1 586 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 TTI2Q6NXR4 508 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 FAM35AQ86V20 835 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 GPIHBP1Q8IV16 184 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 FUKQ8N0W3 1084 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 NELFBQ8WX92 580 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 OVCA2Q8WZ82 227 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 SEMA4DQ92854 862 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 ATOH1Q92858 354 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 SLC35C1Q96A29 364 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 SLITRK1Q96PX8 696 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 HNRNPABQ99729 332 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 DMAP1Q9NPF5 467 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 IL37Q9NZH6 218 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 GCNT4Q9P109 453 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 PIAS3Q9Y6X2 628 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 PATJQ8NI35 1801 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 FAM186AA6NE01 2351 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 WDFY4Q6ZS81 3184 aa11.04□□□□□ -0.64
TRAPPC9-209ENST00000521167 ZNF840PA6NDX5 716 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 SHISA7A6NL88 538 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 C3orf80F5H4A9 247 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 BIN1O00499 593 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 P4HA2O15460 535 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 CILPO75339 1184 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 AP1G2O75843 785 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 FGFR1OPO95684 399 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 GNA14O95837 355 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 DCNP07585 359 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 CD72P21854 359 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 YWHAQP27348 245 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 KPNA1P52294 538 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 CACNA2D1P54289 1103 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 TAF10Q12962 218 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 PAK1Q13153 545 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 ITPRIPL2Q3MIP1 535 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 CCDC40Q4G0X9 1142 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 DCAF17Q5H9S7 520 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 CC2D1AQ6P1N0 951 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 RALGPS2Q86X27 583 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 KIAA1958Q8N8K9 716 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 PDZD8Q8NEN9 1154 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 SLC2A14Q8TDB8 520 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 WHAMMQ8TF30 809 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 FAM3CQ92520 227 aa11.03□□□□□ -0.64
TRAPPC9-209ENST00000521167 CYFIP2Q96F07 1278 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms