RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 STAP2Q9UGK3 403 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 PCDHA6Q9UN73 950 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 CORO2BQ9UQ03 480 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 ADGRA2Q96PE1 1338 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 A0A1W2PPC4 97 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 TRIM43BA6NCK2 446 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 HNRNPDLO14979 420 aaKnown RBP4.84□□□□□ -1.63
SQLE-204ENST00000520493 NR2F6P10588 404 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 CHRM3P20309 590 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 IL6STP40189 918 aaPredicted RBP4.84□□□□□ -1.63
SQLE-204ENST00000520493 TECP42680 631 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 GRK6P43250 576 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 SOX8P57073 446 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 SATB1Q01826 763 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 ICA1Q05084 483 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 SLC44A4Q53GD3 710 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 FAM160B1Q5W0V3 765 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 SFRP4Q6FHJ7 346 aaPredicted RBP4.84□□□□□ -1.63
SQLE-204ENST00000520493 HIBCHQ6NVY1 386 aaPredicted RBP4.84□□□□□ -1.63
SQLE-204ENST00000520493 TLDC1Q6P9B6 456 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 LAYNQ6UX15 382 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 ZNF783Q6ZMS7 281 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 BEND5Q7L4P6 421 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 USP37Q86T82 979 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 ATRIPQ8WXE1 791 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 TRIM43Q96BQ3 446 aaPredicted RBP4.84□□□□□ -1.63
SQLE-204ENST00000520493 NELL2Q99435 816 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 CRB3Q9BUF7 120 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 ZNF518BQ9C0D4 1074 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 AGO4Q9HCK5 861 aaKnown RBP4.84□□□□□ -1.63
SQLE-204ENST00000520493 LUZP4Q9P127 313 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 COL20A1Q9P218 1284 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 CPNE7Q9UBL6 633 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 CPA4Q9UI42 421 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 ST3GAL5Q9UNP4 418 aa4.84□□□□□ -1.63
SQLE-204ENST00000520493 WDR27A2RRH5 827 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 APOL1O14791 398 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 AREL1O15033 823 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 NCK2O43639 380 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 TBC1D4O60343 1298 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 PLA2G6O60733 806 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 RBMXL2O75526 392 aaKnown RBP4.83□□□□□ -1.64
SQLE-204ENST00000520493 RHOP08100 348 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 EBLN1P0CF75 366 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 HSD3B1P14060 373 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 ZFXP17010 805 aaPredicted RBP4.83□□□□□ -1.64
SQLE-204ENST00000520493 GCLCP48506 637 aaPredicted RBP4.83□□□□□ -1.64
SQLE-204ENST00000520493 KCNJ5P48544 419 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 HNRNPMP52272 730 aaKnown RBP eCLIP4.83□□□□□ -1.641e-6■■■■■ 34.2
SQLE-204ENST00000520493 HTRA4P83105 476 aaPredicted RBP4.83□□□□□ -1.64
SQLE-204ENST00000520493 TCF15Q12870 199 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 BMPR2Q13873 1038 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 ARL13BQ3SXY8 428 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 KIAA1614Q5VZ46 1190 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 SYTL1Q8IYJ3 562 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 PAF1Q8N7H5 531 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 MOGAT1Q96PD6 335 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 TTLL2Q9BWV7 592 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 SMOC2Q9H3U7 446 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 MYO1AQ9UBC5 1043 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 PGAP2Q9UHJ9 254 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 FRMD4BQ9Y2L6 1034 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 KAT6AQ92794 2004 aa4.83□□□□□ -1.64
SQLE-204ENST00000520493 A0A087WV62 115 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 MBD3L4A6NDZ8 208 aaPredicted RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 MBD3L3A6NE82 208 aaPredicted RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 GOLGA6L3A6NEY3 463 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 PRSS29PA6NIE9 313 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 CLCA1A8K7I4 914 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 BTN3A1O00481 513 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 PIP5K1CO60331 668 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 TLR5O60602 858 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 CENPBP07199 599 aaPredicted RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 ANXA2P07355 339 aaKnown RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 PIM1P11309 404 aaPredicted RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 NDUFB7P17568 137 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 ABCB4P21439 1286 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 PPM1FP49593 454 aaPredicted RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 CCT8P50990 548 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 RAB32Q13637 225 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 MAPRE1Q15691 268 aaKnown RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 TBCCQ15814 346 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 AMOTQ4VCS5 1084 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 ALFQ53S48 1182 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 ZNF618Q5T7W0 954 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 CCDC70Q6NSX1 233 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 ZNF788Q6ZQV5 615 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 CATSPERGQ6ZRH7 1159 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 ZNF551Q7Z340 670 aaPredicted RBP4.82□□□□□ -1.64
SQLE-204ENST00000520493 PPP1R32Q7Z5V6 425 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 PCGF5Q86SE9 256 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 AMIGO2Q86SJ2 522 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 ZNF354CQ86Y25 554 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 RASAL3Q86YV0 1011 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 NME8Q8N427 588 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 FAM46DQ8NEK8 389 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 CYP2W1Q8TAV3 490 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 HASPINQ8TF76 798 aa4.82□□□□□ -1.64
SQLE-204ENST00000520493 IPCEF1Q8WWN9 437 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms