RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 BMPR2Q13873 1038 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 MAPKAPK3Q16644 382 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 PTCHD3Q3KNS1 767 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 PRR16Q569H4 304 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 FAXCQ5TGI0 409 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 MANEALQ5VSG8 457 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 DBX2Q6ZNG2 339 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 SMC5Q8IY18 1101 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 IZUMO1Q8IYV9 350 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 ZNF527Q8NB42 609 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 SUPT20HQ8NEM7 779 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 FBXL20Q96IG2 436 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 CRB3Q9BUF7 120 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 INO80BQ9C086 356 aaPredicted RBP5.33□□□□□ -1.56
SQLE-202ENST00000518604 GLOD4Q9HC38 313 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 TMEM8AQ9HCN3 771 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 TRIM36Q9NQ86 728 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 DNAJB11Q9UBS4 358 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 SLC39A10Q9ULF5 831 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 CA14Q9ULX7 337 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 USP22Q9UPT9 525 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 COL4A3Q01955 1670 aa5.33□□□□□ -1.56
SQLE-202ENST00000518604 FAM234BA2RU67 622 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 PLEKHD1A6NEE1 506 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 ZAR1LA6NP61 321 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 PODXLO00592 558 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 FZD7O75084 574 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 NDST3O95803 873 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 EGR1P18146 543 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 TACR2P21452 398 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 ATICP31939 592 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 ALDH9A1P49189 494 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 GATMP50440 423 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 ICA1Q05084 483 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 TBCCQ15814 346 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 SLC5A9Q2M3M2 681 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.32□□□□□ -1.56
SQLE-202ENST00000518604 PLAC9Q5JTB6 97 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 FAM83BQ5T0W9 1011 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 Q6YL49 198 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 SKAP1Q86WV1 359 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 GLIS1Q8NBF1 620 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 VPS37AQ8NEZ2 397 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 POF1BQ8WVV4 589 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 SOCS4Q8WXH5 440 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 PBKQ96KB5 322 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 CDC23Q9UJX2 597 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 MAGED2Q9UNF1 606 aaPredicted RBP5.32□□□□□ -1.56
SQLE-202ENST00000518604 HPSEQ9Y251 543 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 SNX14Q9Y5W7 946 aa5.32□□□□□ -1.56
SQLE-202ENST00000518604 A1L4Q6 167 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 ORC4O43929 436 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 CCNT2O60583 730 aaKnown RBP5.31□□□□□ -1.56
SQLE-202ENST00000518604 SNX2O60749 519 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 TCEA3O75764 348 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 CD19P15391 556 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 ADORA2AP29274 412 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 MPLP40238 635 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 PGDP52209 483 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 ITGA8P53708 1063 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 SEC24CP53992 1094 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 PUM1Q14671 1186 aaKnown RBP eCLIP5.31□□□□□ -1.56
SQLE-202ENST00000518604 KCNAB1Q14722 419 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 RAB30Q15771 203 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 PDCD2Q16342 344 aaPredicted RBP5.31□□□□□ -1.56
SQLE-202ENST00000518604 GRAMD1BQ3KR37 738 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 DEPDC1Q5TB30 811 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 KAZNQ674X7 775 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 CRTC1Q6UUV9 634 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 TSHZ1Q6ZSZ6 1077 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 USP51Q70EK9 711 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 CCDC28AQ8IWP9 274 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 AMER2Q8N7J2 671 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 TMEM171Q8WVE6 324 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 CAVIN3Q969G5 261 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 MUL1Q969V5 352 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 HIST1H2AAQ96QV6 131 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 C17orf80Q9BSJ5 609 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 VN1R3Q9BXE9 311 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.31□□□□□ -1.56
SQLE-202ENST00000518604 PCDHAC1Q9H158 963 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 SLC25A32Q9H2D1 315 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 MYH16Q9H6N6 1097 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 ZMYND8Q9ULU4 1186 aaPredicted RBP5.31□□□□□ -1.56
SQLE-202ENST00000518604 RIPOR2Q9Y4F9 1068 aa5.31□□□□□ -1.56
SQLE-202ENST00000518604 EPN1Q9Y6I3 576 aaPredicted RBP5.31□□□□□ -1.56
SQLE-202ENST00000518604 OR2W5A6NFC9 320 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 M0R3H8 397 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 PSMD9O00233 223 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 SKAP2O75563 359 aaPredicted RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 GLP2RO95838 553 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 PRKCBP05771 671 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 ZFXP17010 805 aaPredicted RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 MTHFSP49914 203 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 TIRAPP58753 221 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 MRPS35P82673 323 aaKnown RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 NSUN2Q08J23 767 aaKnown RBP eCLIP5.3□□□□□ -1.56
SQLE-202ENST00000518604 CLCA4Q14CN2 919 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 PUM3Q15397 648 aaKnown RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 TXNRD1Q16881 649 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms