RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NFKBIBQ15653 356 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 FKBP15Q5T1M5 1219 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 DPY19L2P1Q6NXN4 242 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 TRIM67Q6ZTA4 783 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 TTC30AQ86WT1 665 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 PDZD8Q8NEN9 1154 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 TFAP2BQ92481 460 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 FBXO32Q969P5 355 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 FBXO44Q9H4M3 255 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 OBP2AQ9NY56 170 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 HESX1Q9UBX0 185 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 NCANO14594 1321 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 CUL9Q8IWT3 2517 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 PATJQ8NI35 1801 aa23.24■■□□□ 1.31
VEGFA-217ENST00000518538 DENND4CQ5VZ89 1909 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 ZNF840PA6NDX5 716 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 PFKLP17858 780 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 AVPR1AP37288 418 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 VIPR2P41587 438 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 STILQ15468 1287 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 ARHGAP44Q17R89 818 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 LCLAT1Q6UWP7 414 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 VITQ6UXI7 678 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 GPRIN1Q7Z2K8 1008 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 DEPDC1BQ8WUY9 529 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 SHC3Q92529 594 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 UBXN6Q9BZV1 441 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 TRPC7Q9HCX4 862 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 SLC2A4RGQ9NR83 387 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 DNAJC12Q9UKB3 198 aa23.23■■□□□ 1.31
VEGFA-217ENST00000518538 NUP210Q8TEM1 1887 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-217ENST00000518538 TRAV19A0A0A6YYK7 116 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 C2orf78A6NCI8 922 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 LGALS16A8MUM7 142 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 HEPACAM2A8MVW5 462 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 BECN2A8MW95 431 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 PRAMEF12O95522 483 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 BRD2P25440 801 aaKnown RBP23.22■■□□□ 1.31
VEGFA-217ENST00000518538 PDE6CP51160 858 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 BST2Q10589 180 aaKnown RBP23.22■■□□□ 1.31
VEGFA-217ENST00000518538 IQCB1Q15051 598 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 CNGA2Q16280 664 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 RSPRY1Q96DX4 576 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 ASIC4Q96FT7 647 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 ZSWIM1Q9BR11 485 aa23.22■■□□□ 1.31
VEGFA-217ENST00000518538 LSM14BQ9BX40 385 aaKnown RBP23.22■■□□□ 1.31
VEGFA-217ENST00000518538 AJAP1Q9UKB5 411 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-217ENST00000518538 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.22■■□□□ 1.31
VEGFA-217ENST00000518538 DPYSL4O14531 572 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 XPO1O14980 1071 aaKnown RBP23.21■■□□□ 1.31
VEGFA-217ENST00000518538 CAVIN2O95810 425 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 ATP1A3P13637 1013 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 PSMC3P17980 439 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 RFX1P22670 979 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 KIF11P52732 1056 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 GPC5P78333 572 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 PKDCCQ504Y2 493 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 KLHDC7AQ5VTJ3 777 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 APTXQ7Z2E3 356 aaKnown RBP23.21■■□□□ 1.31
VEGFA-217ENST00000518538 PIGZQ86VD9 579 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 MFSD6LQ8IWD5 586 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 CELF5Q8N6W0 485 aaKnown RBP23.21■■□□□ 1.31
VEGFA-217ENST00000518538 TRMT61BQ9BVS5 477 aaKnown RBP23.21■■□□□ 1.31
VEGFA-217ENST00000518538 C11orf16Q9NQ32 467 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 PLCB1Q9NQ66 1216 aa23.21■■□□□ 1.31
VEGFA-217ENST00000518538 MYH10P35580 1976 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 ZNF638Q14966 1978 aaKnown RBP23.2■■□□□ 1.3
VEGFA-217ENST00000518538 TMEM221A6NGB7 291 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 M0R296 226 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 GPR37L1O60883 481 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 USP17L7P0C7H9 530 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 SETSIPP0DME0 302 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 PDE4CQ08493 712 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 GRM2Q14416 872 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 ZNF268Q14587 947 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-217ENST00000518538 SNX30Q5VWJ9 437 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 GPIHBP1Q8IV16 184 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 ARL14EPQ8N8R7 260 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-217ENST00000518538 USP13Q92995 863 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-217ENST00000518538 SMG9Q9H0W8 520 aaKnown RBP23.2■■□□□ 1.3
VEGFA-217ENST00000518538 KIF9Q9HAQ2 790 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 CBX8Q9HC52 389 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 TDP1Q9NUW8 608 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 GMIPQ9P107 970 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 WNT16Q9UBV4 365 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 SCML2Q9UQR0 700 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 FHOD1Q9Y613 1164 aa23.2■■□□□ 1.3
VEGFA-217ENST00000518538 FAM86C2PA6NEL3 165 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 ABL1P00519 1130 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 OAS1P00973 400 aaKnown RBP23.19■■□□□ 1.3
VEGFA-217ENST00000518538 CALCAP01258 141 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 CKMP06732 381 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 CFHP08603 1231 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 ZDHHC11BP0C7U3 371 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 UCHL3P15374 230 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 HDCP19113 662 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 USP8P40818 1118 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 PLA2G4AP47712 749 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 PFKPQ01813 784 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 RAB41Q5JT25 222 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms