RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FIP1L1Q6UN15 594 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 FAM196AQ6ZSG2 479 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 STOX1Q6ZVD7 989 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ANKLE2Q86XL3 938 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 MCATQ8IVS2 390 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 MRPL41Q8IXM3 137 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 PM20D2Q8IYS1 436 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 C16orf71Q8IYS4 520 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ELMOD1Q8N336 334 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 KIAA1958Q8N8K9 716 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 FBXO15Q8NCQ5 510 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 GRPEL2Q8TAA5 225 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 TBC1D16Q8TBP0 767 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ENKURQ8TC29 256 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF398Q8TD17 642 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 CHPT1Q8WUD6 406 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 UCMAQ8WVF2 138 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 NELFBQ8WX92 580 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 SGCDQ92629 289 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ARHGEF2Q92974 986 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 FAM149B1Q96BN6 582 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 TLCD1Q96CP7 247 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAELQ96JY0 434 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 LRRC37BQ96QE4 947 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 DIRC2Q96SL1 478 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDRT15Q96T59 188 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 YME1L1Q96TA2 773 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 NUP88Q99567 741 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 FERMT1Q9BQL6 677 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 GPATCH1Q9BRR8 931 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 TMEM109Q9BVC6 243 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 RHOBTB2Q9BYZ6 727 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ROPN1BQ9BZX4 212 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 LSG1Q9H089 658 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDH19Q9H159 772 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 EHD1Q9H4M9 534 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 NSUN3Q9H649 340 aaKnown RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 DNAJC18Q9H819 358 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 BRD9Q9H8M2 597 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ROPN1Q9HAT0 212 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 FGFR1OP2Q9NVK5 253 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 PAG1Q9NWQ8 432 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 SLC39A1Q9NY26 324 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 STK32BQ9NY57 414 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZSWIM5Q9P217 1185 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 REV1Q9UBZ9 1251 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ADAMTS1Q9UHI8 967 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 LNPEPQ9UIQ6 1025 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ADAM30Q9UKF2 790 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 KIAA1257Q9ULG3 409 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 PCDHA7Q9UN72 937 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 DNM3Q9UQ16 869 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 DNAJC16Q9Y2G8 782 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 POLR3KQ9Y2Y1 108 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 SPEF1Q9Y4P9 236 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 HEY1Q9Y5J3 304 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 CEP152O94986 1710 aa5.03□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF518AQ6AHZ1 1483 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CDK12Q9NYV4 1490 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 DNAJC25-GNG10A0A024R161 153 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 GOLGA8IPA6NC78 632 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 EVPLLA8MZ36 301 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CHURC1-FNTBB4DL54 471 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 H0Y3Z8 333 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC188H7C350 402 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CASQ2O14958 399 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 NCAM2O15394 837 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PPP6R2O75170 966 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CSDE1O75534 798 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CIB2O75838 187 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 DGKIO75912 1065 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 HEXIM1O94992 359 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 HTR3BO95264 441 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 GAS8O95995 478 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 OAS1P00973 400 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 FGAP02671 866 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 AFPP02771 609 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATP1A1P05023 1023 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 HMGN1P05114 100 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 RPS17P08708 135 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 IFIT2P09913 472 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ALAS1P13196 640 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 SCG2P13521 617 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 DDX5P17844 614 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CD53P19397 219 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PKLRP30613 574 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 GTF2H1P32780 548 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PTGS2P35354 604 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CHKAP35790 457 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 IARSP41252 1262 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 KIR3DL1P43629 444 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 HSPA13P48723 471 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 RGS7P49802 495 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 PLCD1P51178 756 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 CHN2P52757 468 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 YARSP54577 528 aaKnown RBP5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 C21orf59P57076 290 aa5.02□□□□□ -1.61
HMGB1P19-201ENST00000517578 ERVFC1P60507 584 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms