RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ADRB2P07550 413 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 HNRNPA1P09651 372 aaKnown RBP eCLIP6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 TXNP10599 105 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 HK1P19367 917 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 CARSP49589 748 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 PPP2R5CQ13362 524 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 KLHL17Q6TDP4 642 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 RNF44Q7L0R7 432 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 FAM83AQ86UY5 434 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 FAM124AQ86V42 546 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 GALNT13Q8IUC8 556 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 LGI4Q8N135 537 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 FITM2Q8N6M3 262 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 MB21D1Q8N884 522 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 DNERQ8NFT8 737 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 CSGALNACT1Q8TDX6 532 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 CREB3L4Q8TEY5 395 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 PHACTR3Q96KR7 559 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 TIGD1Q96MW7 591 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 BAG1Q99933 345 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 SPATA5L1Q9BVQ7 753 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 SEZ6LQ9BYH1 1024 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 NELFAQ9H3P2 528 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 NECTIN3Q9NQS3 549 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 TBC1D23Q9NUY8 699 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 RGL1Q9NZL6 768 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 MID2Q9UJV3 735 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 PLEKHM1Q9Y4G2 1056 aa6.35□□□□□ -1.39
CTNNA1-202ENST00000517533 LMTK3Q96Q04 1460 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 MBD3L4A6NDZ8 208 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 MBD3L3A6NE82 208 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 H7C0S8 307 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 LEFTY2O00292 366 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 SPTLC2O15270 562 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 FOXS1O43638 330 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 VPS4BO75351 444 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 SGPL1O95470 568 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 GNAI2P04899 355 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 ALAS1P13196 640 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 RXRAP19793 462 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 MSX2P35548 267 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 CUL4AQ13619 759 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 RAB32Q13637 225 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 ELAVL1Q15717 326 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 TBC1D10BQ4KMP7 808 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 TCTN3Q6NUS6 607 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 EFCAB12Q6NXP0 572 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 SLC30A6Q6NXT4 461 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 FUKQ8N0W3 1084 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 VGLL2Q8N8G2 317 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 MDGA1Q8NFP4 955 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 ZFP28Q8NHY6 868 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 SCAMP5Q8TAC9 235 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 FEZF2Q8TBJ5 459 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 THAP4Q8WY91 577 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 RAPGEF4Q8WZA2 1011 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 ST8SIA2Q92186 375 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 PRPF18Q99633 342 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 DDX23Q9BUQ8 820 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 EIF2AQ9BY44 585 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 TXLNGYQ9BZA5 131 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 GPR63Q9BZJ6 419 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 ARHGAP39Q9C0H5 1083 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 MS4A7Q9GZW8 240 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 PABPC3Q9H361 631 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 TMEM8AQ9HCN3 771 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 A1CFQ9NQ94 594 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 ATP8A2Q9NTI2 1148 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 HSFX1Q9UBD0 423 aa6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 CFDP1Q9UEE9 299 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 ADD3Q9UEY8 706 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 HERC5Q9UII4 1024 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-202ENST00000517533 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 PRR5-ARHGAP8B1AHC4 643 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 FCHO1O14526 889 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 LAMTOR5O43504 91 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 ANXA1P04083 346 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 PORP16435 677 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 CHRM3P20309 590 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 MUTP22033 750 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 KLRC1P26715 233 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 RABGGTBP53611 331 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 PLIN5Q00G26 463 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 CDC16Q13042 620 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 ZIK1Q3SY52 487 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 XP32Q5T750 250 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 FCRL6Q6DN72 434 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 RPUSD3Q6P087 351 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 DRICH1Q6PGQ1 229 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 FAM47EQ6ZV65 393 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 VSIG1Q86XK7 387 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 ARL10Q8N8L6 244 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 SH3KBP1Q96B97 665 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 MARS2Q96GW9 593 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 TWNKQ96RR1 684 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 DESI2Q9BSY9 194 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 SMOC2Q9H3U7 446 aa6.33□□□□□ -1.4
CTNNA1-202ENST00000517533 PRDM13Q9H4Q3 707 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms