RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 ATP13A1Q9HD20 1204 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ATP13A2Q9NQ11 1180 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 MEPEQ9NQ76 525 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 RTN4Q9NQC3 1192 aaKnown RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 SAMSN1Q9NSI8 373 aaKnown RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 KLC4Q9NSK0 619 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ABCB8Q9NUT2 735 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 DZANK1Q9NVP4 752 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 MCUBQ9NWR8 336 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 NDE1Q9NXR1 346 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 FAM30AQ9NZY2 134 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 THYN1Q9P016 225 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 PIM2Q9P1W9 311 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ANKMY1Q9P2S6 941 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 DKK4Q9UBT3 224 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 CD300AQ9UGN4 299 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ZNF230Q9UIE0 474 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 DBNLQ9UJU6 430 aaKnown RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ADAM28Q9UKQ2 775 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 FZD4Q9ULV1 537 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 PCDHB8Q9UN66 801 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 POLIQ9UNA4 740 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 PDZRN3Q9UPQ7 1066 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 SAMD4AQ9UPU9 718 aaKnown RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ICKQ9UPZ9 632 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ERVW-1Q9UQF0 538 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ZNF443Q9Y2A4 671 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 RAI2Q9Y5P3 530 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 USH1CQ9Y6N9 552 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ASTN2O75129 1339 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 PLXNA4Q9HCM2 1894 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 NCKAP5O14513 1909 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 KIAA1217Q5T5P2 1943 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 ROBO3Q96MS0 1386 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 PCM1Q15154 2024 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 MBD5Q9P267 1494 aa-0.74□□□□□ -2.53
SCARNA17-201ENST00000516183 PAPPAQ13219 1627 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 SHANK3Q9BYB0 1731 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 SBF1O95248 1867 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TRPM6Q9BX84 2022 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 MYOFQ9NZM1 2061 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 LOC110117498A0A087WWA1 95 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 IGKV3D-11A0A0A0MRZ8 115 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 A0A0G2JN53 185 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 GOLGA8QA0A0J9YX86 632 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 FAM236DA0A1B0GTK5 79 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ESYT3A0FGR9 886 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 CDHR4A6H8M9 788 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 GOLGA8OA6NCC3 632 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 FAM83GA6ND36 823 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 GRXCR2A6NFK2 248 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TCAF2A6NFQ2 919 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ODF3BA8MYP8 253 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 RSPH10B2B2RC85 870 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TARM1B6A8C7 271 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 LOC110117498-PIK3R3F6TDL0 507 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 GOLGA8NF8WBI6 632 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TMEM178BH3BS89 294 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 MYO1FO00160 1098 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 HAS3O00219 553 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TULP1O00294 542 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ELL2O00472 640 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ISLRO14498 428 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 N4BP3O15049 544 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 GPR42O15529 346 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ZNF749O43361 778 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 XRCC3O43542 346 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 SGCEO43556 437 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 GDF9O60383 454 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 CCNT1O60563 726 aaKnown RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 SNAP91O60641 907 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TBX10O75333 385 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 OFD1O75665 1012 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 DGKIO75912 1065 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ALDH1A2O94788 518 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 PRPF6O94906 941 aaKnown RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 SNUPNO95149 360 aaKnown RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 UNC5CO95185 931 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TRIM16O95361 564 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 CBX6O95503 412 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 C22orf31O95567 290 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ADCY5O95622 1261 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 TGM6O95932 706 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 PTTG1O95997 202 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 PDGFBP01127 241 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 HPXP02790 462 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 CD74P04233 296 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 VIMP08670 466 aaKnown RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 CHRM5P08912 532 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 C1SP09871 688 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 CCDC159P0C7I6 412 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 MSL3P1P0C860 447 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 RSPH10BP0C881 870 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 PRR35P0CG20 571 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 ZNF853P0CG23 659 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 PGA4P0DJD7 388 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 PGA3P0DJD8 388 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 PGA5P0DJD9 388 aa-0.75□□□□□ -2.53
SCARNA17-201ENST00000516183 FAM236CP0DP71 79 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms