RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 RNASE12Q5GAN4 147 aaKnown RBP3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 CERCAMQ5T4B2 595 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 DENND2CQ68D51 928 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 BCDIN3DQ7Z5W3 292 aaKnown RBP3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 TECPR1Q7Z6L1 1165 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 CUL5Q93034 780 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 CCDC17Q96LX7 622 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 AIFM3Q96NN9 605 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 PRR25Q96S07 402 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 C17orf80Q9BSJ5 609 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 WACQ9BTA9 647 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 DPH1Q9BZG8 443 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 MS4A7Q9GZW8 240 aaPredicted RBP3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 NMRK2Q9NPI5 230 aa3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 TRNAU1APQ9NX07 287 aaKnown RBP3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 SCAF8Q9UPN6 1271 aaKnown RBP3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 NOP58Q9Y2X3 529 aaKnown RBP3.65□□□□□ -1.83
RNU4-49P-201ENST00000516080 MYMKA6NI61 221 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 M0R3H8 397 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 SOCS2O14508 198 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 FCHO1O14526 889 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 TBC1D4O60343 1298 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 UBXN7O94888 489 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 NTN1O95631 604 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 FGBP02675 491 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 NPR1P16066 1061 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 PRKAR1BP31321 381 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 GKP32189 559 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 CTBP1Q13363 440 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 MLC1Q15049 377 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 Q4G0T1 1027 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 MEX3CQ5U5Q3 659 aaKnown RBP3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZNF517Q6ZMY9 492 aaPredicted RBP3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 SPARTQ8N0X7 666 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 C16orf52Q8NHV5 167 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZNF398Q8TD17 642 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 COQ8BQ96D53 544 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 MMS19Q96T76 1030 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 GBA2Q9HCG7 927 aaPredicted RBP3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 TYW1Q9NV66 732 aaKnown RBP3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 KLHL13Q9P2N7 655 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 GABBR1Q9UBS5 961 aa3.64□□□□□ -1.83
RNU4-49P-201ENST00000516080 CES2O00748 559 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 INSIG1O15503 277 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 PMPCBO75439 489 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 ALDH1L1O75891 902 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 RNF8O76064 485 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 VNN1O95497 513 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 MT-CO3P00414 261 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 TMEM191BP0C7N4 346 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 SNHG28P0DPA3 235 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 BCAT1P54687 386 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 GHRHRQ02643 423 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 SLC13A2Q13183 592 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 PIN1Q13526 163 aaPredicted RBP3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 TWIST1Q15672 202 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 INSCQ1MX18 579 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZNF260Q3ZCT1 412 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 DPY19L3Q6ZPD9 716 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 MPP5Q8N3R9 675 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 SLC35G2Q8TBE7 412 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 TMEM171Q8WVE6 324 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 RAPGEF4Q8WZA2 1011 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 SUCLG2Q96I99 432 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 EFHD1Q9BUP0 239 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 RHOBTB2Q9BYZ6 727 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZNF518BQ9C0D4 1074 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 XPNPEP3Q9NQH7 507 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 SNX15Q9NRS6 342 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 ASIC5Q9NY37 505 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 PI4KBQ9UBF8 816 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 USP22Q9UPT9 525 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 DRG1Q9Y295 367 aaKnown RBP3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 AFG3L2Q9Y4W6 797 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 FER1L4A9Z1Z3 1794 aa3.63□□□□□ -1.83
RNU4-49P-201ENST00000516080 PHGDHO43175 533 aaKnown RBP3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 EN2P19622 333 aaPredicted RBP3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 EPHA3P29320 983 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 MTHFSP49914 203 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 AGFG1P52594 562 aaKnown RBP3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 PSG6Q00889 435 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 PTCHD3Q3KNS1 767 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 ANO6Q4KMQ2 910 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 SHC4Q6S5L8 630 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 PTCHD4Q6ZW05 846 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 JPH3Q8WXH2 748 aaPredicted RBP3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZC3H10Q96K80 434 aaKnown RBP3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 PPP1R9BQ96SB3 815 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 TRIM5Q9C035 493 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 A1CFQ9NQ94 594 aaKnown RBP3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 ZNF180Q9UJW8 692 aa3.62□□□□□ -1.83
RNU4-49P-201ENST00000516080 KITP10721 976 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 COPB1P53618 953 aaKnown RBP3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 MCL1Q07820 350 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 LMAN2Q12907 356 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 LRRC41Q15345 812 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 TTF1Q15361 905 aaPredicted RBP3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
RNU4-49P-201ENST00000516080 ANO7Q6IWH7 933 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms