RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 HNRNPDLO14979 420 aaKnown RBP6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 TCEA3O75764 348 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 ARP10275 920 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 EGR1P18146 543 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 MST1P26927 711 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 PCSK6P29122 969 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 PDIA3P30101 505 aaKnown RBP6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 NTSR1P30989 418 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 UQCRC1P31930 480 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 LIPAP38571 399 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 TIAL1Q01085 375 aaKnown RBP eCLIP6.11□□□□□ -1.433e-11■■■■■ 48
HMGCS1-207ENST00000514610 GALNT1Q10472 559 aaPredicted RBP6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 FHL3Q13643 280 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 CCNIQ14094 377 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 RAB30Q15771 203 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 TBCCQ15814 346 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 SLC9A4Q6AI14 798 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 FBXO38Q6PIJ6 1188 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 Q6ZNX1 250 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 MYLK4Q86YV6 388 aaPredicted RBP6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 CCDC28AQ8IWP9 274 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 LCORLQ8N3X6 602 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 CCDC150Q8NCX0 1101 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 BEND2Q8NDZ0 799 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 MUL1Q969V5 352 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 FBXL20Q96IG2 436 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 PGBD1Q96JS3 809 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 C17orf80Q9BSJ5 609 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 TM7SF3Q9NS93 570 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 ARID4BQ4LE39 1312 aaPredicted RBP6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 A1L4Q6 167 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 AQP12BA6NM10 295 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 FFAR2O15552 330 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 PEX1O43933 1283 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 PECAM1P16284 738 aaPredicted RBP6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 TGM1P22735 817 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 MPLP40238 635 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 FOLR3P41439 243 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 BLOC1S1P78537 153 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 FOXI1Q12951 378 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 PTPRRQ15256 657 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 PUM3Q15397 648 aaKnown RBP6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 ARHGAP15Q53QZ3 475 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 TMTC4Q5T4D3 741 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 CCDC174Q6PII3 467 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 USP17L6PQ6QN14 398 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 IZUMO1Q8IYV9 350 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 ZNF527Q8NB42 609 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 TFAP2BQ92481 460 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 RFKQ969G6 155 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 FAM227BQ96M60 508 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 SLC25A32Q9H2D1 315 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 OBP2BQ9NPH6 170 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 KLC4Q9NSK0 619 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 DNAJB11Q9UBS4 358 aa6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 MAGED2Q9UNF1 606 aaPredicted RBP6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 EPN1Q9Y6I3 576 aaPredicted RBP6.1□□□□□ -1.43
HMGCS1-207ENST00000514610 SLC16A3O15427 465 aaKnown RBP6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 TLR5O60602 858 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 ADH4P08319 380 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 IL6RP08887 468 aaPredicted RBP6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 HKR1P10072 659 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 KRT4P19013 534 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 PGDP52209 483 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 SLC5A9Q2M3M2 681 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 ZXDCQ2QGD7 858 aaPredicted RBP6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 TREML2Q5T2D2 321 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 FAXCQ5TGI0 409 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 GGNQ86UU5 652 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 EXOC8Q8IYI6 725 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 ATRIPQ8WXE1 791 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 SOCS4Q8WXH5 440 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 R3HDM4Q96D70 268 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 GLOD4Q9HC38 313 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 ZBTB26Q9HCK0 441 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 NECTIN3Q9NQS3 549 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 RIMKLBQ9ULI2 386 aa6.09□□□□□ -1.43
HMGCS1-207ENST00000514610 GOLGA6L3A6NEY3 463 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 LGALS16A8MUM7 142 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 PIP5K1BO14986 540 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 NPC1O15118 1278 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 MPPED1O15442 326 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 NBNO60934 754 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 LMNAP02545 664 aaKnown RBP6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 FESP07332 822 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 TACR2P21452 398 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 PRKAR1BP31321 381 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 ADRA1BP35368 520 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 SEC24CP53992 1094 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 TIRAPP58753 221 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 MAPKAPK3Q16644 382 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 ABLIM2Q6H8Q1 611 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 MRNIPQ6NTE8 343 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 PGBD2Q6P3X8 592 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 SMC5Q8IY18 1101 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 PBKQ96KB5 322 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 COQ10AQ96MF6 247 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 HIST1H2AAQ96QV6 131 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms